RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MYOZ1Q9NP98 299 aaPredicted RBP1.44□□□□□ -2.18
VBP1-204ENST00000625964 MED4Q9NPJ6 270 aa1.44□□□□□ -2.18
VBP1-204ENST00000625964 MMACHCQ9Y4U1 282 aa1.44□□□□□ -2.18
VBP1-204ENST00000625964 BPTFQ12830 3046 aa1.44□□□□□ -2.18
VBP1-204ENST00000625964 TEP1Q99973 2627 aaKnown RBP1.44□□□□□ -2.18
VBP1-204ENST00000625964 CEP295Q9C0D2 2601 aa1.44□□□□□ -2.18
VBP1-204ENST00000625964 UBR2Q8IWV8 1755 aa1.44□□□□□ -2.18
VBP1-204ENST00000625964 LRRC37A2A6NM11 1700 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CHD7Q9P2D1 2997 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
VBP1-204ENST00000625964 SHANK1Q9Y566 2161 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 SMIM26A0A096LP01 95 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 A0A0J9YXV3 536 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 A0A1B0GW55 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CEACAM18A8MTB9 384 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 K7EMT4 169 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 MANBAO00462 879 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CLOCKO15516 846 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 PLIN3O60664 434 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 OR2J3O76001 311 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DUX4L2P0CJ85 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DUX4L3P0CJ86 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DUX4L5P0CJ88 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DUX4L6P0CJ89 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DUX4L7P0CJ90 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CT45A6P0DMU7 189 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CT45A5P0DMU8 189 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CT45A7P0DMV0 189 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CYBAP13498 195 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 SLC1A1P43005 524 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DDX39BQ13838 428 aaKnown RBP1.43□□□□□ -2.18
VBP1-204ENST00000625964 DGCR6Q14129 220 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 PSMD5Q16401 504 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 KRTAP6-3Q3LI67 103 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CT45A1Q5HYN5 189 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 C12orf54Q6X4T0 127 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 C16orf47Q6ZP98 133 aaPredicted RBP1.43□□□□□ -2.18
VBP1-204ENST00000625964 NANOGNBQ7Z5D8 188 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CMTM1Q8IZ96 169 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 IQCKQ8N0W5 287 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 OR10G6Q8NH81 332 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 CT45A3Q8NHU0 189 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 RAB3IL1Q8TBN0 382 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 PHOSPHO2Q8TCD6 241 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
VBP1-204ENST00000625964 ZFP3Q96NJ6 502 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 SAMD10Q9BYL1 202 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 DUX4Q9UBX2 424 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 ASXL3Q9C0F0 2248 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 PLXNA3P51805 1871 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 SCN1AP35498 2009 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 SPTAN1Q13813 2472 aaKnown RBP1.43□□□□□ -2.18
VBP1-204ENST00000625964 DOPEY1Q5JWR5 2465 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 ANKRD17O75179 2603 aaKnown RBP1.43□□□□□ -2.18
VBP1-204ENST00000625964 HECTD1Q9ULT8 2610 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 LTBP2Q14767 1821 aa1.43□□□□□ -2.18
VBP1-204ENST00000625964 TRIOO75962 3097 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 DNAH12Q6ZR08 3092 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 LRRC37AA6NMS7 1700 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 NCBP2LA6PVI3 153 aaKnown RBP1.42□□□□□ -2.18
VBP1-204ENST00000625964 SYCE1LA8MT33 242 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 CNMDO75829 334 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 IGLV6-57P01721 117 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 SERPINE2P07093 398 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 LGALS3P17931 250 aaKnown RBP1.42□□□□□ -2.18
VBP1-204ENST00000625964 IL32P24001 234 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 SYKP43405 635 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 TAS2R46P59540 309 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 ACTR3P61158 418 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 ART3Q13508 389 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 NCF4Q15080 339 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 STUMQ69YW2 141 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 NPSR1Q6W5P4 371 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 MBOAT2Q6ZWT7 520 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 SNX31Q8N9S9 440 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 OR56B2PQ8NGI1 322 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 CAPSLQ8WWF8 208 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 COL21A1Q96P44 957 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 CENPKQ9BS16 269 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 C1orf50Q9BV19 199 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 ANKRD60Q9BZ19 345 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 PORCNQ9H237 461 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 CCDC59Q9P031 241 aaKnown RBP1.42□□□□□ -2.18
VBP1-204ENST00000625964 PLXNA1Q9UIW2 1896 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 SHROOM3Q8TF72 1996 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 NUP98P52948 1817 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 XIRP2A4UGR9 3374 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 ANKRD36CQ5JPF3 1778 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 IGF2RP11717 2491 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 ELP1O95163 1332 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 MROH7Q68CQ1 1323 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 MGAMO43451 1857 aa1.42□□□□□ -2.18
VBP1-204ENST00000625964 DDX60Q8IY21 1712 aaKnown RBP1.42□□□□□ -2.18
VBP1-204ENST00000625964 DMXL1Q9Y485 3027 aa1.41□□□□□ -2.18
VBP1-204ENST00000625964 SMCO3A2RU48 225 aa1.41□□□□□ -2.18
VBP1-204ENST00000625964 OR6C70A6NIJ9 312 aa1.41□□□□□ -2.18
VBP1-204ENST00000625964 PDZK1P1A8MUH7 402 aa1.41□□□□□ -2.18
VBP1-204ENST00000625964 LOC730098B7Z3J9 87 aa1.41□□□□□ -2.18
VBP1-204ENST00000625964 H7C1H1 209 aa1.41□□□□□ -2.18
VBP1-204ENST00000625964 SIRPB1O00241 398 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms