RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 MFAP5Q13361 173 aa16.19■□□□□ 0.18
UPF1-210ENST00000600689 FAM57BQ71RH2 274 aa16.19■□□□□ 0.18
UPF1-210ENST00000600689 WDSUB1Q8N9V3 476 aa16.19■□□□□ 0.18
UPF1-210ENST00000600689 PAPOLGQ9BWT3 736 aaKnown RBP16.19■□□□□ 0.18
UPF1-210ENST00000600689 MYO7BQ6PIF6 2116 aa16.19■□□□□ 0.18
UPF1-210ENST00000600689 FAM221BA6H8Z2 402 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 H7C1Q1 480 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 DXOO77932 396 aaKnown RBP16.18■□□□□ 0.18
UPF1-210ENST00000600689 PET100P0DJ07 73 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 S100PP25815 95 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 SLC6A8P48029 635 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 CHAF1BQ13112 559 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 BRICD5Q6PL45 260 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 C9orf40Q8IXQ3 194 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 FNDC9Q8TBE3 224 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 ZNF775Q96BV0 537 aaPredicted RBP16.18■□□□□ 0.18
UPF1-210ENST00000600689 C14orf166Q9Y224 244 aaKnown RBP16.18■□□□□ 0.18
UPF1-210ENST00000600689 COL6A3P12111 3177 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 ABCA7Q8IZY2 2146 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 IGHV5-51A0A0C4DH38 117 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 TMEM14DPA8MWL7 114 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 MS4A18H0YCH9 400 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 RER1O15258 196 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 GPR37O15354 613 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 CST4P01036 141 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 SLC6A9P48067 706 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 CCR5P51681 352 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 MS4A18Q3C1V0 323 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 OR10S1Q8NGN2 331 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 B3GALT1Q9Y5Z6 326 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 MUC3AQ02505 3323 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 THADAQ6YHU6 1953 aa16.18■□□□□ 0.18
UPF1-210ENST00000600689 FAM221AA4D161 298 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 FPR2P25090 351 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 EIF5AP63241 154 aaKnown RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 ACTBL2Q562R1 376 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 OR2B11Q5JQS5 317 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 CCNL2Q96S94 520 aaPredicted RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 RARRES2Q99969 163 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 ZNF2Q9BSG1 426 aaPredicted RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 CNTNAP3Q9BZ76 1288 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 RNF122Q9H9V4 155 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 ASH2LQ9UBL3 628 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 B3GALT5Q9Y2C3 310 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 TIMM10BQ9Y5J6 103 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 AGAP20933 346 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 OPRM1P35372 400 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 EIF2S3P41091 472 aaKnown RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 IGLV3-21P80748 117 aaPredicted RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 C6orf201Q7Z4U5 140 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 FAM213BQ8TBF2 198 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 DAZLQ92904 295 aaKnown RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 PTX4Q96A99 478 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 SGK3Q96BR1 496 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 SLC46A1Q96NT5 459 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 KCNJ16Q9NPI9 418 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 GPR27Q9NS67 375 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 MEMO1Q9Y316 297 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 FAM157AC9JC47 383 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 MT-ATP6P00846 226 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 ISG15P05161 165 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 PPP1CCP36873 323 aaKnown RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 EFNA3P52797 238 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 RRADP55042 308 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 KIAA0141Q14154 515 aaPredicted RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 PEG10Q86TG7 708 aaKnown RBP16.17■□□□□ 0.18
UPF1-210ENST00000600689 MFSD8Q8NHS3 518 aa16.17■□□□□ 0.18
UPF1-210ENST00000600689 IFNA2P01563 188 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 JMJD7P0C870 316 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 ZNF121P58317 390 aaPredicted RBP16.16■□□□□ 0.18
UPF1-210ENST00000600689 HSF1Q00613 529 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 GGNBP1Q5YKI7 109 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 TMEM182Q6ZP80 229 aaPredicted RBP16.16■□□□□ 0.18
UPF1-210ENST00000600689 BATF2Q8N1L9 274 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 ARRDC1Q8N5I2 433 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 ZNF283Q8N7M2 679 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 PIGTQ969N2 578 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 PRRX2Q99811 253 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 CA14Q9ULX7 337 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 STMND1H3BQB6 276 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 OMGP23515 440 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 NOVA1P51513 510 aaKnown RBP16.16■□□□□ 0.18
UPF1-210ENST00000600689 RAB2AP61019 212 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 PHLDA2Q53GA4 152 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 PLXDC2Q6UX71 529 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 LANCL3Q6ZV70 420 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 C20orf196Q8IYI0 205 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 LMX1AQ8TE12 382 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 RNF133Q8WVZ7 376 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 ADIPOR1Q96A54 375 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 GGACTQ9BVM4 153 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 PARP11Q9NR21 331 aa16.16■□□□□ 0.18
UPF1-210ENST00000600689 AP4M1O00189 453 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 IGLV3-19P01714 112 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 KLK3P07288 261 aaPredicted RBP16.15■□□□□ 0.18
UPF1-210ENST00000600689 TMEM268Q5VZI3 342 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 DNM1P34Q6PK57 102 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 OR5AS1Q8N127 324 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 KCNG3Q8TAE7 436 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms