RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SMIM19Q96E16 107 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 RNF170Q96K19 258 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 SMR3AQ99954 134 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 YTHDF1Q9BYJ9 559 aaKnown RBP11.55□□□□□ -0.56
VRK3-219ENST00000600137 OR51I2Q9H344 312 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 GPR173Q9NS66 373 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 C14orf119Q9NWQ9 140 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 NPTNQ9Y639 398 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 MALRD1Q5VYJ5 2156 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.54□□□□□ -0.56
VRK3-219ENST00000600137 LRP5LA4QPB2 252 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 CLDN25C9JDP6 229 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.54□□□□□ -0.56
VRK3-219ENST00000600137 IFNL4K9M1U5 179 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 TNFRSF13BO14836 293 aaPredicted RBP11.54□□□□□ -0.56
VRK3-219ENST00000600137 SMAD7O15105 426 aaKnown RBP11.54□□□□□ -0.56
VRK3-219ENST00000600137 PLPP2O43688 288 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 FSTL3O95633 263 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 CD1AP06126 327 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 INHBBP09529 407 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 CDH15P55291 814 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 ZMYND11Q15326 602 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 RNF144BQ7Z419 303 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 LRRC28Q86X40 367 aaPredicted RBP11.54□□□□□ -0.56
VRK3-219ENST00000600137 GCSAMQ8N6F7 178 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 SCCPDHQ8NBX0 429 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 OR8S1Q8NH09 359 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 CLDND2Q8NHS1 167 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 GHSRQ92847 366 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 C1orf159Q96HA4 380 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 MICU1Q9BPX6 476 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 CHST5Q9GZS9 411 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 Q9H521 79 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 METTL17Q9H7H0 456 aaPredicted RBP11.54□□□□□ -0.56
VRK3-219ENST00000600137 TMEM165Q9HC07 324 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 ABCB9Q9NP78 766 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 ERGIC3Q9Y282 383 aa11.54□□□□□ -0.56
VRK3-219ENST00000600137 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.54□□□□□ -0.564e-10■■■■■ 37.9
VRK3-219ENST00000600137 IGKV1-27A0A075B6S5 117 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 TRBV5-5A0A0J9YX44 114 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 PQLC2LA1A4F0 135 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ANKRD61A6NGH8 418 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 TMEM210A6NLX4 147 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ANXA2P2A6NMY6 339 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ZNF732B4DXR9 585 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 CDIPTO14735 213 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 MYL12BO14950 172 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ZNF205O95201 554 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ZNF12P17014 697 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 EGR1P18146 543 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 MAP2K4P45985 399 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 GPM6AP51674 278 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 BDH1Q02338 343 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 SLC3A1Q07837 685 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 SPHARQ15513 63 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ZNF529Q6P280 563 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 UTS2BQ765I0 119 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 PARP16Q8N5Y8 322 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 OR13C5Q8NGS8 318 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 RPL3LQ92901 407 aaKnown RBP11.53□□□□□ -0.56
VRK3-219ENST00000600137 RTL8AQ9BWD3 113 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 MND1Q9BWT6 205 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
VRK3-219ENST00000600137 FN3KRPQ9HA64 309 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 TRIM36Q9NQ86 728 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 RNF7Q9UBF6 113 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ZNF281Q9Y2X9 895 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 ARHGAP32A7KAX9 2087 aa11.53□□□□□ -0.56
VRK3-219ENST00000600137 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
VRK3-219ENST00000600137 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 RHBDL1O75783 438 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 PCMT1P22061 227 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 GABARAPL2P60520 117 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 GNG3P63215 75 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 MZT1Q08AG7 82 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 PLCXD3Q63HM9 321 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 C19orf18Q8NEA5 215 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 PP6455Q8WZ26 134 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 AQP3Q92482 292 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 RAB1CQ92928 201 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 COMMD4Q9H0A8 199 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.57
VRK3-219ENST00000600137 ALX3O95076 343 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 LY6G6DO95868 133 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 RPSAP08865 295 aaKnown RBP11.51□□□□□ -0.57
VRK3-219ENST00000600137 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 ATF1P18846 271 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 CELP19835 753 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 MPZP25189 248 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 TAS2R43P59537 309 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 BTG1P62324 171 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 EMX1Q04741 257 aaPredicted RBP11.51□□□□□ -0.57
VRK3-219ENST00000600137 TPBGQ13641 420 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 TMEM155Q4W5P6 130 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 UNQ9370/PRO34162Q6UXP9 181 aa11.51□□□□□ -0.57
VRK3-219ENST00000600137 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms