RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RAB40BQ12829 278 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 MED21Q13503 144 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 TMEM244Q5VVB8 128 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 LYPD2Q6UXB3 125 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 CATSPERDQ86XM0 798 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 SCCPDHQ8NBX0 429 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 CCDC54Q8NEL0 328 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 OR5A2Q8NGI9 324 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 NANPQ8TBE9 248 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 RORBQ92753 470 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 ITPKCQ96DU7 683 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 DCLRE1BQ9H816 532 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 INPP5EQ9NRR6 644 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 GPR173Q9NS66 373 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 ACOXLQ9NUZ1 547 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 AUP1Q9Y679 476 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 DYSFO75923 2080 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 IRGMA1A4Y4 181 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 A6NIN4 97 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 OR5B21A6NL26 309 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 E9PQ18 207 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 F5H0A9 414 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 DLGAP1O14490 977 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 UBCP0CG48 685 aaKnown RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 MUC1P15941 1255 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF20P17024 532 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 GABRB1P18505 474 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 GLRA1P23415 457 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 NPY4RP50391 375 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 GBX2P52951 348 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 ELF3P78545 371 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 GALEQ14376 348 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 CDONQ4KMG0 1287 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 DMRTC1Q5HYR2 192 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 WDR38Q5JTN6 314 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 CD276Q5ZPR3 534 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 WDR82Q6UXN9 313 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 WDR86Q86TI4 376 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF573Q86YE8 665 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 GCSAMQ8N6F7 178 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF676Q8N7Q3 588 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 OR10Z1Q8NGY1 313 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 OR14K1Q8NGZ2 314 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 C4orf36Q96KX1 117 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 MDFIQ99750 246 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 ALG8Q9BVK2 526 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 MMP26Q9NRE1 261 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 V9GYS6 101 aa8.42□□□□□ -1.06
BRCA1-227ENST00000591849 YLPM1P49750 1951 aaKnown RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 FBN1P35555 2871 aaKnown RBP8.42□□□□□ -1.06
BRCA1-227ENST00000591849 PPIAL4CA0A0B4J2A2 164 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 A0A1B0GTI1 187 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 LOC107986453A0A1B0GWG9 222 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 FAM230AA0A1W2PPH8 454 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 ANKRD61A6NGH8 418 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 NKX6-3A6NJ46 265 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 TRAPPC2LH3BP13 241 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 AKR7A2O43488 359 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 NDUFB3O43676 98 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 GATBO75879 557 aaKnown RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 CLIC3O95833 236 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 LHBP01229 141 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 IGLV3-1P01715 115 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 EGR1P18146 543 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 MYL12AP19105 171 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 FPR2P25090 351 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 CAPGP40121 348 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 HAAOP46952 286 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 GABRA2P47869 451 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 HOXA4Q00056 320 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 SLC34A1Q06495 639 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 IL18R1Q13478 541 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 SMN1Q16637 294 aaKnown RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 ARMCX4Q5H9R4 360 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 OGFRL1Q5TC84 451 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF691Q5VV52 312 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 WDR25Q64LD2 544 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 HAGHLQ6PII5 290 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 TMPRSS11AQ6ZMR5 421 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 SLC36A1Q7Z2H8 476 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 C11orf53Q8IXP5 236 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 RDH10Q8IZV5 341 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 C8orf59Q8N0T1 100 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 OR52I1Q8NGK6 324 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 OR2G2Q8NGZ5 317 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 TRMT10AQ8TBZ6 339 aaKnown RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 HPSE2Q8WWQ2 592 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 RAB40AQ8WXH6 277 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 ST8SIA4Q92187 359 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 TMIGD2Q96BF3 282 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 CCL13Q99616 98 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 NUDT16L1Q9BRJ7 211 aaKnown RBP8.41□□□□□ -1.06
BRCA1-227ENST00000591849 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 COMMD4Q9H0A8 199 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 RASSF4Q9H2L5 321 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 OR51I2Q9H344 312 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms