RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GADD45AP24522 165 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 CFPP27918 469 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 MAGEB1P43366 347 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 INSL4Q14641 139 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 UBE2V2Q15819 145 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 CEACAM21Q3KPI0 293 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 AGAP6Q5VW22 663 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 C20orf204Q6ZNR8 217 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 Q6ZR03 302 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 SATL1Q86VE3 508 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 TPRA1Q86W33 373 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 FBXL14Q8N1E6 418 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 OR5A2Q8NGI9 324 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 OR13C5Q8NGS8 318 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 MS4A5Q9H3V2 200 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 NOX4Q9NPH5 578 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 BATF3Q9NR55 127 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 CBLN4Q9NTU7 201 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 BEX4Q9NWD9 120 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 MYEF2Q9P2K5 600 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 DUSP13Q9UII6 198 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 CEPT1Q9Y6K0 416 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 ROS1P08922 2347 aa9.47□□□□□ -0.89
CDK5RAP3-204ENST00000577664 IGKV1-9A0A0C4DH69 117 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ANKRD61A6NGH8 418 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 A6NHS1 94 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 OVOL3O00110 214 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 AIREO43918 545 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TIMM8AO60220 97 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 LILRA1O75019 489 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TMEM127O75204 238 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 FAHP16930 419 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ATF1P18846 271 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PPOXP50336 477 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PSMD7P51665 324 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 GFOD2Q3B7J2 385 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 FAM209AQ5JX71 171 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 VHLLQ6RSH7 139 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 LRRTM1Q86UE6 522 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 COMMD2Q86X83 199 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 RAB2BQ8WUD1 216 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TSEN15Q8WW01 171 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 OR5P3Q8WZ94 311 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SPSB1Q96BD6 273 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TRAF4Q9BUZ4 470 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TMEM138Q9NPI0 162 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SNTG1Q9NSN8 517 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SVEP1Q4LDE5 3571 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 NOTCH1P46531 2555 aa9.46□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PLSCR5A0PG75 271 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 DPPA5A6NC42 116 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 OR5B21A6NL26 309 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 C17orf100A8MU93 164 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 MLNRO43193 412 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SULT1B1O43704 296 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 BMP4P12644 408 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PAX1P15863 534 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ZNF20P17024 532 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PRKACBP22694 351 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CFHR2P36980 270 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CD200P41217 278 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 GATA4P43694 442 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SOX2P48431 317 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 MTNR1BP49286 362 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 FUT6P51993 359 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 MZT1Q08AG7 82 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PRDX4Q13162 271 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 HSD17B12Q53GQ0 312 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CEP78Q5JTW2 689 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 GPR107Q5VW38 600 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 OR5AS1Q8N127 324 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 OR1M1Q8NGA1 313 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PIGCQ92535 297 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 DGCR14Q96DF8 476 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 KCTD7Q96MP8 289 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SYT3Q9BQG1 590 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CENPOQ9BU64 300 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TLNRD1Q9H1K6 362 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PLEKHA1Q9HB21 404 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CKLFQ9UBR5 152 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 IL19Q9UHD0 177 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 FZR1Q9UM11 496 aa9.45□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ARFGEF3Q5TH69 2177 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TRAV8-7A0A075B6U6 113 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SHISA3A0PJX4 238 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 PQLC2LA1A4F0 135 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 TMEM210A6NLX4 147 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ZNF850A8MQ14 1090 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 H7C417 338 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 M0R233 179 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SPRY1O43609 319 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 IL1AP01583 271 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 ERCC1P07992 297 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 SOD3P08294 240 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 RAB3AP20336 220 aa9.44□□□□□ -0.9
CDK5RAP3-204ENST00000577664 CA6P23280 308 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms