RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 Q96MF0 132 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 OPALINQ96PE5 141 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF696Q9H7X3 374 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 UFSP2Q9NUQ7 469 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 CACNG2Q9Y698 323 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
RPAIN-217ENST00000575711 A0A087WXM4 84 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 TRBV5-5A0A0J9YX44 114 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 LRRC30A6NM36 301 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF732B4DXR9 585 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 CPEP16870 476 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 PCMT1P22061 227 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-217ENST00000575711 TMEM33P57088 247 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 RPS11P62280 158 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF154Q13106 437 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 MPPED2Q15777 294 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 UBE2V2Q15819 145 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF181Q2M3W8 571 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 Q499Y3 187 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 ARMCX4Q5H9R4 360 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 DMRTC1Q5HYR2 192 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 UBE2UQ5VVX9 321 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 PEG10Q86TG7 708 aaKnown RBP11.81□□□□□ -0.52
RPAIN-217ENST00000575711 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 PARP16Q8N5Y8 322 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 TSPAN14Q8NG11 270 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 OR5D14Q8NGL3 314 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 OR13C5Q8NGS8 318 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 Q8TCH9 128 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 THRSPQ92748 146 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 TMEM106AQ96A25 262 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 NR1H4Q96RI1 486 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-217ENST00000575711 TMED9Q9BVK6 235 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 FGF23Q9GZV9 251 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-217ENST00000575711 ZCCHC4Q9H5U6 513 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 NEK6Q9HC98 313 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 C1orf123Q9NWV4 160 aa11.81□□□□□ -0.52
RPAIN-217ENST00000575711 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 FAM230AA0A1W2PPH8 454 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 hCG_1807616A0A1W2PRN6 198 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 LRP5LA4QPB2 252 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF879B4DU55 563 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 PPIHO43447 177 aaKnown RBP11.8□□□□□ -0.52
RPAIN-217ENST00000575711 SLC25A16P16260 332 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 ATF1P18846 271 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 PRKACBP22694 351 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 GIFP27352 417 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 PSMB9P28065 219 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 FUT6P51993 359 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 RIN1Q13671 783 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 TRAM1Q15629 374 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 FAM76BQ5HYJ3 339 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 WDR86Q86TI4 376 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 C1orf87Q8N0U7 546 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 OR13C9Q8NGT0 318 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 TRMT10AQ8TBZ6 339 aaKnown RBP11.8□□□□□ -0.52
RPAIN-217ENST00000575711 NPRL2Q8WTW4 380 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 SPSB1Q96BD6 273 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 BORCS8Q96FH0 119 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 TIMD4Q96H15 378 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 BPESC1Q9GZL8 116 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 TLNRD1Q9H1K6 362 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 VCX3AQ9NNX9 186 aa11.8□□□□□ -0.52
RPAIN-217ENST00000575711 PQLC2LA1A4F0 135 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 CDIPTO14735 213 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 CYB5R3P00387 301 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-217ENST00000575711 AZGP1P25311 298 aaKnown RBP11.79□□□□□ -0.52
RPAIN-217ENST00000575711 PSMA1P25786 263 aaKnown RBP11.79□□□□□ -0.52
RPAIN-217ENST00000575711 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-217ENST00000575711 PMELP40967 661 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 NR4A2P43354 598 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 PPP3R1P63098 170 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 NEDD8Q15843 81 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF573Q86YE8 665 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 PHC2Q8IXK0 858 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 RPL3LQ92901 407 aaKnown RBP11.79□□□□□ -0.52
RPAIN-217ENST00000575711 RAB1CQ92928 201 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 OR14A2Q96R54 314 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 OR51I2Q9H344 312 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 DCAF16Q9NXF7 216 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 TAS2R4Q9NYW5 299 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 RNF7Q9UBF6 113 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 CKLFQ9UBR5 152 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 ARID1AO14497 2285 aa11.79□□□□□ -0.52
RPAIN-217ENST00000575711 IGKV1-9A0A0C4DH69 117 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 TRIM64BA6NI03 449 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 VWC2LB2RUY7 222 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 CCRL2O00421 344 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 SULT1B1O43704 296 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 INMTO95050 263 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 ALX3O95076 343 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 HCKP08631 526 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 RAB3AP20336 220 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 GABRA5P31644 462 aa11.78□□□□□ -0.52
RPAIN-217ENST00000575711 HAAOP46952 286 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms