RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 TMED1Q13445 227 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 LRRC36Q1X8D7 754 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 WDR38Q5JTN6 314 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 BCL2L15Q5TBC7 163 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 TEX36Q5VZQ5 186 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 KCTD8Q6ZWB6 473 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 ZDHHC23Q8IYP9 409 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 RDH10Q8IZV5 341 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 RHOXF1Q8NHV9 184 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 APH1BQ8WW43 257 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 RAB40AQ8WXH6 277 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 C22orf15Q8WYQ4 148 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 RFKQ969G6 155 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 LGALS12Q96DT0 336 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 CCL13Q99616 98 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF649Q9BS31 505 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 RTL8AQ9BWD3 113 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 OR51I2Q9H344 312 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 OCEL1Q9H607 264 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 GPR173Q9NS66 373 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 SNTG1Q9NSN8 517 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 ACOXLQ9NUZ1 547 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF391Q9UJN7 358 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 EXOGQ9Y2C4 368 aaKnown RBP8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 MYRFQ9Y2G1 1151 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 SNX5Q9Y5X3 404 aa8.51□□□□□ -1.05
GTF3C1-213ENST00000571886 IGHV3OR16-10A0A075B7F0 116 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 TRAV38-1A0A0B4J264 116 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 IGHV2-70DA0A0C4DH43 119 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 SRRM5B3KS81 715 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 SLC16A6O15403 523 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 SULT1C4O75897 302 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 NRASP01111 189 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 DBTP11182 482 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 SELLP14151 372 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 ATP6V1B1P15313 513 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 EPHA1P21709 976 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 GATA3P23771 443 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 CFHR2P36980 270 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF91Q05481 1191 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 SMN1Q16637 294 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 CEACAM21Q3KPI0 293 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 MEDAGQ5VYS4 303 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 TMEM42Q69YG0 159 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 LHFPL3Q86UP9 236 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 BCL6BQ8N143 479 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 NANPQ8TBE9 248 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 CLN8Q9UBY8 286 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 OR5V1Q9UGF6 321 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 GNG8Q9UK08 70 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 AUP1Q9Y679 476 aa8.5□□□□□ -1.05
GTF3C1-213ENST00000571886 KIR2DS1A0A191URI9 304 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 DAPL1A0PJW8 107 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 TMEM210A6NLX4 147 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 DVL1O14640 695 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 SYNGR1O43759 233 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 WBP4O75554 376 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 IGHV4-38-2P0DP08 117 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 CCL1P22362 96 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 CPT2P23786 658 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 PEX2P28328 305 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 NANOS3P60323 173 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 GNG3P63215 75 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 RCN1Q15293 331 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 SNCBQ16143 134 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 CDONQ4KMG0 1287 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 PLCXD3Q63HM9 321 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 BATF2Q8N1L9 274 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 FTMTQ8N4E7 242 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 FAM216BQ8N7L0 139 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 OR5A2Q8NGI9 324 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 OR10Z1Q8NGY1 313 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 OR2G2Q8NGZ5 317 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 STMN2Q93045 179 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF488Q96MN9 340 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 TECTBQ96PL2 329 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 HIST1H2AAQ96QV6 131 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 SLC6A7Q99884 636 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 NUDT16L1Q9BRJ7 211 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 MOB1AQ9H8S9 216 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 ISG20L2Q9H9L3 353 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 SMPD3Q9NY59 655 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 ERVK-18Q9QC07 812 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF69Q9UC07 566 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 ENPP5Q9UJA9 477 aa8.49□□□□□ -1.05
GTF3C1-213ENST00000571886 E9PI62 339 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 J3QLW9 94 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 TMPRSS2O15393 492 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 TCF21O43680 179 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 MTRF1O75570 445 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 MUC1P15941 1255 aaPredicted RBP8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF19P17023 458 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 TGM4P49221 684 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 FGF12P61328 243 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 MICBQ29980 383 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms