RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-208	ENST00000569066	ACBD4	Q8NC06	268 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	KCNS3	Q9BQ31	491 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	PDCD10	Q9BUL8	212 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	DNTTIP1	Q9H147	329 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	SRMS	Q9H3Y6	488 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	EFCAB1	Q9HAE3	211 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	FGF20	Q9NP95	211 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	ZNF302	Q9NR11	478 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	TAS2R9	Q9NYW1	312 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	NUFIP1	Q9UHK0	495 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	SCN2A	Q99250	2005 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	TIAM1	Q13009	1591 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	CHD1	O14646	1710 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	TOPBP1	Q92547	1522 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	SLC5A10	A0PJK1	596 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	ERI2	A8K979	691 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	NPIPB7	O75200	414 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	MOS	P00540	346 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	DDT	P30046	118 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	POLR2I	P36954	125 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	RPS15	P62841	145 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	MRPS22	P82650	360 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	ECH1	Q13011	328 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	ANGPT1	Q15389	498 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	ZNF181	Q2M3W8	571 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	NCMAP	Q5T1S8	102 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	MFSD14C	Q5VZR4	134 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	TMEM220	Q6QAJ8	160 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	CYHR1	Q6ZMK1	362 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	SMIM15	Q7Z3B0	74 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	CYP4Z1	Q86W10	505 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	TCTE3	Q8IZS6	198 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	ZFP82	Q8N141	532 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	STK40	Q8N2I9	435 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	LINC00301	Q8NCQ3	95 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	OR2G2	Q8NGZ5	317 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	NEIL3	Q8TAT5	605 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	RAB2B	Q8WUD1	216 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	DCAKD	Q8WVC6	231 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	TCEAL4	Q96EI5	215 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	L3HYPDH	Q96EM0	354 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	CPNE2	Q96FN4	548 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	FCRL1	Q96LA6	429 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	VAT1	Q99536	393 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	GGACT	Q9BVM4	153 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	UGT2B28	Q9BY64	529 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	MIXL1	Q9H2W2	232 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	CLCF1	Q9UBD9	225 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	PSMD13	Q9UNM6	376 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	POFUT2	Q9Y2G5	429 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	POLR3H	Q9Y535	204 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	DCC	P43146	1447 aa		4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	MYH9	P35579	1960 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-208	ENST00000569066	RALGAPB	Q86X10	1494 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	IGKV1D-13	A0A0B4J2D9	117 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	GABRR3	A8MPY1	467 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	KRBOX1	C9JBD0	128 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	RAD1	O60671	282 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	SCN2B	O60939	215 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CA11	O75493	328 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	HTR1A	P08908	422 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CHTF8	P0CG12	524 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	IGKV1-13	P0DP09	117 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	GZMH	P20718	246 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	DTYMK	P23919	212 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	HSD11B1	P28845	292 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CD1B	P29016	333 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	PSMD8	P48556	350 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ARRB1	P49407	418 aa	Predicted RBP	4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	KRTAP10-12	P60413	245 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	IL5RA	Q01344	420 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ORC2	Q13416	577 aa	Predicted RBP	4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	NEDD8	Q15843	81 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	FBXW9	Q5XUX1	488 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	KDM4D	Q6B0I6	523 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ABHD13	Q7L211	337 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ZNF584	Q8IVC4	421 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CTAGE3P	Q8IX95	158 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	YIPF7	Q8N8F6	280 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CCDC54	Q8NEL0	328 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	BPIFB6	Q8NFQ5	453 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	NRGN	Q92686	78 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ISG20	Q96AZ6	181 aa	Known RBP	4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	S100PBP	Q96BU1	408 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	PPP3R2	Q96LZ3	170 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	EBNA1BP2	Q99848	306 aa	Known RBP	4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	SUCNR1	Q9BXA5	334 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CWH43	Q9H720	699 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	MS4A12	Q9NXJ0	267 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CALY	Q9NYX4	217 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CDK13	Q14004	1512 aa	Known RBP	4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ARHGEF10	O15013	1369 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	KNDC1	Q76NI1	1749 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	CYSRT1	A8MQ03	144 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	TRIM49D1	C9J1S8	452 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	SMLR1	H3BR10	107 aa		4.05	□□□□□ -1.76
UBR1-208	ENST00000569066	ADAP1	O75689	374 aa		4.05	□□□□□ -1.76

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