RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 TGIF2LYQ8IUE0 185 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 PHC2Q8IXK0 858 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 OR1M1Q8NGA1 313 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 OR5D14Q8NGL3 314 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 FAM168AQ92567 244 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 TMEM106AQ96A25 262 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 TECTBQ96PL2 329 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 TMED9Q9BVK6 235 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 ZCCHC4Q9H5U6 513 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 CHODLQ9H9P2 273 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 SLC7A11Q9UPY5 501 aa14.15□□□□□ -0.14
COMMD4-224ENST00000568877 ZNF879B4DU55 563 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 INMTO95050 263 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 ATF1P18846 271 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 PMELP40967 661 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 GPM6AP51674 278 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 ZNF154Q13106 437 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 CNN3Q15417 329 aaKnown RBP14.14□□□□□ -0.15
COMMD4-224ENST00000568877 NEDD8Q15843 81 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 ZNF420Q8TAQ5 688 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-224ENST00000568877 C10orf105Q8TEF2 133 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 THRSPQ92748 146 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 OR14A2Q96R54 314 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 FN3KRPQ9HA64 309 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 TMEM106BQ9NUM4 274 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 UFSP2Q9NUQ7 469 aa14.14□□□□□ -0.15
COMMD4-224ENST00000568877 AKAP9Q99996 3911 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TRBV5-7A0A0A0MS05 114 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 IGKV1-9A0A0C4DH69 117 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 PQLC2LA1A4F0 135 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 A6NLC8 198 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TRIM64CA6NLI5 447 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 IFNL4K9M1U5 179 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 NDUFS8O00217 210 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 GIFP27352 417 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 FUT6P51993 359 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TMEM33P57088 247 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 RPS25P62851 125 aaKnown RBP14.13□□□□□ -0.15
COMMD4-224ENST00000568877 HNRNPA0Q13151 305 aaKnown RBP14.13□□□□□ -0.15
COMMD4-224ENST00000568877 RIN1Q13671 783 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TRAM1Q15629 374 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 SSX1Q16384 188 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 ZNF181Q2M3W8 571 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 ACSM3Q53FZ2 586 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 SYT6Q5T7P8 510 aaPredicted RBP14.13□□□□□ -0.15
COMMD4-224ENST00000568877 UNQ9370/PRO34162Q6UXP9 181 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 C11orf53Q8IXP5 236 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 OR13C9Q8NGT0 318 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 OR11L1Q8NGX0 322 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TRMT10AQ8TBZ6 339 aaKnown RBP14.13□□□□□ -0.15
COMMD4-224ENST00000568877 Q8TCH9 128 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 NPRL2Q8WTW4 380 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TMEM203Q969S6 136 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 Q96MF0 132 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 TLNRD1Q9H1K6 362 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 OR51I2Q9H344 312 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 VCX3AQ9NNX9 186 aa14.13□□□□□ -0.15
COMMD4-224ENST00000568877 SF3B6Q9Y3B4 125 aaKnown RBP14.13□□□□□ -0.15
COMMD4-224ENST00000568877 IGHV4-30-2A0A087WSY4 118 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 FAM230AA0A1W2PPH8 454 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 LRP5LA4QPB2 252 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 LRRC30A6NM36 301 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 CLDN25C9JDP6 229 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 CCRL2O00421 344 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 ALX3O95076 343 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 OCMP0CE72 109 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-224ENST00000568877 PRKACBP22694 351 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 AZGP1P25311 298 aaKnown RBP14.12□□□□□ -0.15
COMMD4-224ENST00000568877 PSMA1P25786 263 aaKnown RBP14.12□□□□□ -0.15
COMMD4-224ENST00000568877 MAPK3P27361 379 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-224ENST00000568877 GABRA5P31644 462 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 ASPHD2Q6ICH7 369 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 ZNF529Q6P280 563 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 ZNF573Q86YE8 665 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 SCCPDHQ8NBX0 429 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 DNAAF1Q8NEP3 725 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 WFDC11Q8NEX6 87 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 RPL3LQ92901 407 aaKnown RBP14.12□□□□□ -0.15
COMMD4-224ENST00000568877 HPS1Q92902 700 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 SPSB1Q96BD6 273 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 DERL3Q96Q80 235 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 PIMREGQ9BSJ6 248 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 NEK6Q9HC98 313 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 C1orf123Q9NWV4 160 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 DCAF16Q9NXF7 216 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 TAS2R4Q9NYW5 299 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 NOTCH2Q04721 2471 aa14.12□□□□□ -0.15
COMMD4-224ENST00000568877 A0A1W2PPK0 400 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 CDIPTO14735 213 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 PIN1P1O15428 100 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 PPIHO43447 177 aaKnown RBP14.11□□□□□ -0.15
COMMD4-224ENST00000568877 SULT1B1O43704 296 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 SC5DO75845 299 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 IRF2P14316 349 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 RAB3AP20336 220 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 RBMXP38159 391 aaKnown RBP14.11□□□□□ -0.15
COMMD4-224ENST00000568877 INSL4Q14641 139 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 ZNF826PQ6ZT77 177 aa14.11□□□□□ -0.15
COMMD4-224ENST00000568877 CEACAM19Q7Z692 300 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms