RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 SPRY3O43610 288 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 NCR1O76036 304 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 IGHV1-46P01743 117 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 ANXA2P07355 339 aaKnown RBP11.41□□□□□ -0.58
CLK3-218ENST00000566926 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 SELEP16581 610 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
CLK3-218ENST00000566926 COL8A2P25067 703 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 RANBP1P43487 201 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 KIR3DL2P43630 455 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 SLC6A9P48067 706 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 PSMD7P51665 324 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 MALLQ13021 153 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 HFEQ30201 348 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 HSD17B12Q53GQ0 312 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 UNQ9370/PRO34162Q6UXP9 181 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 AP3S1Q92572 193 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 HPS1Q92902 700 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 CMBLQ96DG6 245 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 DCUN1D5Q9BTE7 237 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 ZNF275Q9NSD4 429 aaPredicted RBP11.41□□□□□ -0.58
CLK3-218ENST00000566926 DHDHQ9UQ10 334 aa11.41□□□□□ -0.58
CLK3-218ENST00000566926 A0A1B0GVI7 797 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 DHRS7CA6NNS2 312 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 PDCD5O14737 125 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 PPIHO43447 177 aaKnown RBP11.4□□□□□ -0.58
CLK3-218ENST00000566926 SYT7O43581 403 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 LILRA1O75019 489 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 MTRF1O75570 445 aaKnown RBP11.4□□□□□ -0.58
CLK3-218ENST00000566926 LCATP04180 440 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 CD55P08174 381 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 ACSM4P0C7M7 580 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 ZNF182P17025 639 aaPredicted RBP11.4□□□□□ -0.58
CLK3-218ENST00000566926 CCL1P22362 96 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
CLK3-218ENST00000566926 RORCP51449 518 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 PRKXP51817 358 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 DOK3Q7L591 496 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 PRSS45Q7RTY3 260 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 TSEN15Q8WW01 171 aaKnown RBP11.4□□□□□ -0.58
CLK3-218ENST00000566926 YIPF5Q969M3 257 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 TMEM106AQ96A25 262 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 SLC25A46Q96AG3 418 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 C10orf35Q96D05 121 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 DERL3Q96Q80 235 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 OR14A2Q96R54 314 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 OPA3Q9H6K4 179 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 PTTG3PQ9NZH4 202 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
CLK3-218ENST00000566926 NF1P21359 2839 aa11.4□□□□□ -0.59
CLK3-218ENST00000566926 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 CDC14BO60729 498 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 RP2O75695 350 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 TTRP02766 147 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 TNFAIP6P98066 277 aaPredicted RBP11.39□□□□□ -0.59
CLK3-218ENST00000566926 DYNC1I2Q13409 638 aaKnown RBP11.39□□□□□ -0.59
CLK3-218ENST00000566926 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
CLK3-218ENST00000566926 KRTAP21-3Q3LHN1 58 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
CLK3-218ENST00000566926 OR8B12Q8NGG6 310 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 RGP1Q92546 391 aaPredicted RBP11.39□□□□□ -0.59
CLK3-218ENST00000566926 TSC22D3Q99576 134 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 MMP27Q9H306 513 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 MSL2Q9HCI7 577 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 FOXJ3Q9UPW0 622 aa11.39□□□□□ -0.59
CLK3-218ENST00000566926 WNK2Q9Y3S1 2297 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 TRBV5-7A0A0A0MS05 114 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 LOC100289279A0A1B0GTE1 492 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 LRP5LA4QPB2 252 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 MEGF11A6BM72 1044 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 ANKRD61A6NGH8 418 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 XRCC2O43543 280 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 LMX1BO60663 402 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 CRLF1O75462 422 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 CLPXO76031 633 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 CDRT1O95170 752 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 IGLV3-1P01715 115 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 FSTP19883 344 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 SDC2P34741 201 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 ZNF404Q494X3 552 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 TMEM255AQ5JRV8 349 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 Q6ZSR3 168 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 FAM57BQ71RH2 274 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 OR8G5Q8NG78 346 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 OR2Z1Q8NG97 314 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms