RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PRR14LQ5THK1 2151 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 TRAV8-7A0A075B6U6 113 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 A0A1B0GWJ7 208 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 A6NLC8 198 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 F5H5P2 479 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 H0YL77 283 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 SLC22A1O15245 554 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 MLNRO43193 412 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 CDRT1O95170 752 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 CYB5AP00167 134 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 CD8AP01732 235 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 GRPP07492 148 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 CD55P08174 381 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 ADH4P08319 380 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 PRF1P14222 555 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 IRF2P14316 349 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 RAB3BP20337 219 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 ZNF93P35789 620 aaPredicted RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 SERPINB10P48595 397 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 GPM6AP51674 278 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 KISS1Q15726 138 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 DDI2Q5TDH0 399 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 HIST2H2BCQ6DN03 193 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 C11orf71Q6IPW1 123 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 ZNF529Q6P280 563 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 USP43Q70EL4 1123 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 TPRA1Q86W33 373 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 CDH26Q8IXH8 852 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 ZCCHC24Q8N2G6 241 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 JAGN1Q8N5M9 183 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 OR52N4Q8NGI2 321 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 ZNF671Q8TAW3 534 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 NPRL2Q8WTW4 380 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 HPSE2Q8WWQ2 592 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 GTF3AQ92664 365 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 RPL3LQ92901 407 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 ORAI1Q96D31 301 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 TRMT61AQ96FX7 289 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 MEGF10Q96KG7 1140 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 OR2V2Q96R30 315 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 S100A13Q99584 98 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 PPIL3Q9H2H8 161 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 FN3KRPQ9HA64 309 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 SAP30LQ9HAJ7 183 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 BATF3Q9NR55 127 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 RSL24D1Q9UHA3 163 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 AK6Q9Y3D8 172 aaKnown RBP6.62□□□□□ -1.35
CDH1-208ENST00000565810 CADP27708 2225 aa6.62□□□□□ -1.35
CDH1-208ENST00000565810 NBPF19A0A087WUL8 3843 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 hCG_1807616A0A1W2PRN6 198 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 PQLC2LA1A4F0 135 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 LRP5LA4QPB2 252 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 DPPA5A6NC42 116 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 TRIM64BA6NI03 449 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 LRRC30A6NM36 301 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 H7C417 338 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 IFNL4K9M1U5 179 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 DNASE1P24855 282 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 SDC2P34741 201 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 THBS2P35442 1172 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 CDKN1AP38936 164 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 HAAOP46952 286 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 VBP1P61758 197 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 NCS1P62166 190 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 CCL8P80075 99 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 MXD1Q05195 221 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 MAB21L1Q13394 359 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 CTF1Q16619 201 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 FAM76BQ5HYJ3 339 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 DMRTC1Q5HYR2 192 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 HAGHLQ6PII5 290 aaPredicted RBP6.61□□□□□ -1.35
CDH1-208ENST00000565810 LRRTM1Q86UE6 522 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 CROCCP3Q8IVE0 287 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 MKXQ8IYA7 352 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 OR51A2Q8NGJ7 313 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 OR11L1Q8NGX0 322 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 ITLN1Q8WWA0 313 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 HPS1Q92902 700 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 ISOC1Q96CN7 298 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 SORCS2Q96PQ0 1159 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 UQCC2Q9BRT2 126 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 FAM192AQ9GZU8 254 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 NAA50Q9GZZ1 169 aaKnown RBP6.61□□□□□ -1.35
CDH1-208ENST00000565810 OR51I2Q9H344 312 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 RNF167Q9H6Y7 350 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 METTL17Q9H7H0 456 aaPredicted RBP6.61□□□□□ -1.35
CDH1-208ENST00000565810 PPP1R3EQ9H7J1 279 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 PLGRKTQ9HBL7 147 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 PCDHB16Q9NRJ7 776 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 POLDIP2Q9Y2S7 368 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 CEPT1Q9Y6K0 416 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 V9GY05 133 aa6.61□□□□□ -1.35
CDH1-208ENST00000565810 HELZ2Q9BYK8 2649 aaKnown RBP6.61□□□□□ -1.35
CDH1-208ENST00000565810 ICE1Q9Y2F5 2266 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 IGHV3-64DA0A0J9YX35 117 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 LOC100289279A0A1B0GTE1 492 aa6.6□□□□□ -1.35
CDH1-208ENST00000565810 NOTOA8MTQ0 251 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms