RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 G6PC2Q9NQR9 355 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 INPP5EQ9NRR6 644 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 PGPEP1Q9NXJ5 209 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 SMPD3Q9NY59 655 aaPredicted RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 ZNF319Q9P2F9 582 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 MRM2Q9UI43 246 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 GNG8Q9UK08 70 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 OR52A1Q9UKL2 312 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 SLC7A11Q9UPY5 501 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 POLDIP2Q9Y2S7 368 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 RPL36Q9Y3U8 105 aaKnown RBP3.66□□□□□ -1.82
SNX1-205ENST00000559339 CR1P17927 2039 aa3.66□□□□□ -1.82
SNX1-205ENST00000559339 MALRD1Q5VYJ5 2156 aa3.65□□□□□ -1.82
SNX1-205ENST00000559339 IGHV2-70DA0A0C4DH43 119 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 KIR2DS1A0A191URI9 304 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ANKRD61A6NGH8 418 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 NKX6-3A6NJ46 265 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ZNF732B4DXR9 585 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 F5H0A9 414 aaPredicted RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 TRAPPC2LH3BP13 241 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 J3QL48 77 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 J3QLW9 94 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 DVL1O14640 695 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SLC16A6O15403 523 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MAGEB4O15481 346 aaPredicted RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 AKR7A2O43488 359 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 NDUFB3O43676 98 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ENTPD6O75354 484 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 GATBO75879 557 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 APOL3O95236 402 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 IGLV3-1P01715 115 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 GYPAP02724 150 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 TTRP02766 147 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 HTR1AP08908 422 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 UBCP0CG48 685 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 FAHP16930 419 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ZNF19P17023 458 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ADRA2CP18825 462 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MYL12AP19105 171 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ANOS1P23352 680 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 GLRA1P23415 457 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 PSMB10P40306 273 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 HAAOP46952 286 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 BPIFB3P59826 476 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 GMFBP60983 142 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SEC61A1P61619 476 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 CSNK2BP67870 215 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MFGE8Q08431 387 aaPredicted RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 MRPL28Q13084 256 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 MED21Q13503 144 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 GALEQ14376 348 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 RCN1Q15293 331 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 CNN3Q15417 329 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 ODF4Q2M2E3 257 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 CDONQ4KMG0 1287 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 FAM201AQ5SY85 155 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 TMEM244Q5VVB8 128 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 METTL11BQ5VVY1 283 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 TEX36Q5VZQ5 186 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 TTC23Q5W5X9 447 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 WDR25Q64LD2 544 aaPredicted RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 HAGHLQ6PII5 290 aaPredicted RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 FIP1L1Q6UN15 594 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 WDR82Q6UXN9 313 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ZNF826PQ6ZT77 177 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 USP43Q70EL4 1123 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 KRT74Q7RTS7 529 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 C1QL2Q7Z5L3 287 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 FAM90A1Q86YD7 464 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 C11orf53Q8IXP5 236 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 ENTHD1Q8IYW4 607 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 PACRGLQ8N7B6 248 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SCCPDHQ8NBX0 429 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SETD9Q8NE22 299 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 C19orf18Q8NEA5 215 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 OR10Z1Q8NGY1 313 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 RHOXF1Q8NHV9 184 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SPATA3Q8NHX4 192 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 CYGBQ8WWM9 190 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 PP6455Q8WZ26 134 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 RORBQ92753 470 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 RPL3LQ92901 407 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 UBE2FQ969M7 185 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 TMIGD2Q96BF3 282 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MED30Q96HR3 178 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MBOAT4Q96T53 435 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SLC29A1Q99808 456 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 NUDT16L1Q9BRJ7 211 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 SUCNR1Q9BXA5 334 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MS4A7Q9GZW8 240 aaPredicted RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 COMMD4Q9H0A8 199 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 DNTTIP1Q9H147 329 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 TLNRD1Q9H1K6 362 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 OR51I2Q9H344 312 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 MMP26Q9NRE1 261 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 FAM118AQ9NWS6 357 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 CHCHD3Q9NX63 227 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 RASL12Q9NYN1 266 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 NLKQ9UBE8 527 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 KAAG1Q9UBP8 84 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms