RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 RTL8AQ9BWD3 113 aa9.42□□□□□ -0.9
TMEM260-208ENST00000555905 FAIMQ9NVQ4 179 aa9.42□□□□□ -0.9
TMEM260-208ENST00000555905 NKIRAS2Q9NYR9 191 aa9.42□□□□□ -0.9
TMEM260-208ENST00000555905 CCDC59Q9P031 241 aaKnown RBP9.42□□□□□ -0.9
TMEM260-208ENST00000555905 MYEF2Q9P2K5 600 aaKnown RBP9.42□□□□□ -0.9
TMEM260-208ENST00000555905 PLCE1Q9P212 2302 aa9.42□□□□□ -0.9
TMEM260-208ENST00000555905 OR5B21A6NL26 309 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 B9A039 149 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 HS3ST1O14792 307 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 PRF1P14222 555 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 ZNF182P17025 639 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-208ENST00000555905 TNFSF4P23510 183 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 ZNF93P35789 620 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-208ENST00000555905 RBP2P50120 134 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 ZNF81P51508 661 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 MMP15P51511 669 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 GPM6AP51674 278 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 ATP1B3P54709 279 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 MTCP1P56278 107 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 CAV3P56539 151 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 GNG3P63215 75 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 KISS1Q15726 138 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 EFNB3Q15768 340 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 DMRTC1Q5HYR2 192 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 SFXN4Q6P4A7 337 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 MUC15Q8N387 334 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 PNLDC1Q8NA58 520 aaKnown RBP9.41□□□□□ -0.9
TMEM260-208ENST00000555905 OR2Z1Q8NG97 314 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 AP3S1Q92572 193 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 RNF170Q96K19 258 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 SORCS2Q96PQ0 1159 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 UQCC2Q9BRT2 126 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 CXXC4Q9H2H0 198 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 METTL17Q9H7H0 456 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-208ENST00000555905 PPP1R3EQ9H7J1 279 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 PLGRKTQ9HBL7 147 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 C14orf119Q9NWQ9 140 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 FBXO9Q9UK97 447 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-208ENST00000555905 ZDHHC8Q9ULC8 765 aa9.41□□□□□ -0.9
TMEM260-208ENST00000555905 A0A0G2JK05 382 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 A0A1B0GWJ7 208 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 PQLC2LA1A4F0 135 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 IFITM5A6NNB3 132 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 ZNF732B4DXR9 585 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 M0R233 179 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 AIPO00170 330 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 SLC17A2O00624 439 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 TMEM127O75204 238 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 ALDH3B1P43353 468 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 SNRPD2P62316 118 aaKnown RBP9.4□□□□□ -0.9
TMEM260-208ENST00000555905 RAB11BQ15907 218 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 IDNKQ5T6J7 187 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 AGAP6Q5VW22 663 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 Q6ZR03 302 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 NR2C2APQ86WQ0 139 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 OR10AD1Q8NGE0 317 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 OR6M1Q8NGM8 313 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 HPSE2Q8WWQ2 592 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 DVL3Q92997 716 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-208ENST00000555905 SPACA5Q96QH8 159 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 DIRC2Q96SL1 478 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 GFI1Q99684 422 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 UBTD1Q9HAC8 227 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 DYNLRB1Q9NP97 96 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 DAPK2Q9UIK4 370 aa9.4□□□□□ -0.9
TMEM260-208ENST00000555905 ZSCAN5BA6NJL1 495 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 TMEM210A6NLX4 147 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 F5H5P2 479 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 H0YL77 283 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 MLNRO43193 412 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 SPRY3O43610 288 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 CD37P11049 281 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 NAT2P11245 290 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 BMP4P12644 408 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 HTR2CP28335 458 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
TMEM260-208ENST00000555905 CAPZA1P52907 286 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 RIN1Q13671 783 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 C1orf100Q5SVJ3 147 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 HES5Q5TA89 166 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 MZT2AQ6P582 158 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 ZNF573Q86YE8 665 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 ZNF671Q8TAW3 534 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 ACOT12Q8WYK0 555 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 GTF3AQ92664 365 aaKnown RBP9.39□□□□□ -0.91
TMEM260-208ENST00000555905 RFT1Q96AA3 541 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 ELMOD3Q96FG2 381 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 S100A13Q99584 98 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 MRI1Q9BV20 369 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 BARHL1Q9BZE3 327 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 MS4A5Q9H3V2 200 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 CNTD2Q9H8S5 307 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 CBLN4Q9NTU7 201 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 PTTG2Q9NZH5 202 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 STEAP1Q9UHE8 339 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 LRRK2Q5S007 2527 aa9.39□□□□□ -0.91
TMEM260-208ENST00000555905 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
TMEM260-208ENST00000555905 IGKV1-27A0A075B6S5 117 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms