RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZNF732B4DXR9 585 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 F5H5P2 479 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 PDCD5O14737 125 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 PAX1P15863 534 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 MYL9P24844 172 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 AZGP1P25311 298 aaKnown RBP10.58□□□□□ -0.72
SHMT2-221ENST00000555773 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
SHMT2-221ENST00000555773 GATA4P43694 442 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 RBP2P50120 134 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 ATP1B3P54709 279 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 TMBIM6P55061 237 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 MTCP1P56278 107 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 KRTAP10-9P60411 292 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 CCL8P80075 99 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 MAB21L1Q13394 359 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 TESK1Q15569 626 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 FAM27D1Q5T7N8 215 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 GPR107Q5VW38 600 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 C22orf42Q6IC83 251 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 LHFPL2Q6ZUX7 228 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 SATL1Q86VE3 508 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 TPRA1Q86W33 373 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 ZCCHC24Q8N2G6 241 aaKnown RBP10.58□□□□□ -0.72
SHMT2-221ENST00000555773 OR10AD1Q8NGE0 317 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 HPSE2Q8WWQ2 592 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 FOXRED1Q96CU9 486 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-221ENST00000555773 BORCS8Q96FH0 119 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 MEGF10Q96KG7 1140 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF701Q9NV72 531 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-221ENST00000555773 NDUFA13Q9P0J0 144 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 DCHS2Q6V1P9 2916 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 TRAV8-7A0A075B6U6 113 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 LOC100289279A0A1B0GTE1 492 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 FAM230AA0A1W2PPH8 454 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 LRP5LA4QPB2 252 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 TRIM64BA6NI03 449 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 IFNL4K9M1U5 179 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 TPD52L2O43399 206 aaKnown RBP10.57□□□□□ -0.72
SHMT2-221ENST00000555773 GABARAPO95166 117 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 F12P00748 615 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-221ENST00000555773 CD37P11049 281 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 DNASE1P24855 282 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 THBS2P35442 1172 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 RANBP1P43487 201 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 MTNR1BP49286 362 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 GPM6AP51674 278 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 EFNA4P52798 201 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 MRPS11P82912 194 aaKnown RBP10.57□□□□□ -0.72
SHMT2-221ENST00000555773 GLT8D1Q68CQ7 371 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-221ENST00000555773 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 RPL3LQ92901 407 aaKnown RBP10.57□□□□□ -0.72
SHMT2-221ENST00000555773 NINJ1Q92982 152 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 ORAI1Q96D31 301 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 TPK1Q9H3S4 243 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 LIME1Q9H400 295 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 SAP30LQ9HAJ7 183 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 UNC79Q9P2D8 2635 aa10.57□□□□□ -0.72
SHMT2-221ENST00000555773 MAS1P04201 325 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 GRPP07492 148 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 HCKP08631 526 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 CFHR2P36980 270 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 CDKN1AP38936 164 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 KISS1Q15726 138 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 SLC16A12Q6ZSM3 486 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 LRRTM1Q86UE6 522 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 OR52N4Q8NGI2 321 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 OR51A2Q8NGJ7 313 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF420Q8TAQ5 688 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-221ENST00000555773 TRMT10AQ8TBZ6 339 aaKnown RBP10.56□□□□□ -0.72
SHMT2-221ENST00000555773 NPRL2Q8WTW4 380 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 RAB2BQ8WUD1 216 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 ITLN1Q8WWA0 313 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 DVL3Q92997 716 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-221ENST00000555773 CENPOQ9BU64 300 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 FGF23Q9GZV9 251 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-221ENST00000555773 TLNRD1Q9H1K6 362 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 FN3KRPQ9HA64 309 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 BARX1Q9HBU1 254 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-221ENST00000555773 DLL4Q9NR61 685 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 BEX4Q9NWD9 120 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-221ENST00000555773 CELSR2Q9HCU4 2923 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 CRYBG3Q68DQ2 2970 aa10.56□□□□□ -0.72
SHMT2-221ENST00000555773 NAV2Q8IVL1 2488 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 SMIM31A0A1B0GVY4 71 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 NOL3O60936 208 aaKnown RBP10.55□□□□□ -0.72
SHMT2-221ENST00000555773 ACAA1P09110 424 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF93P35789 620 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-221ENST00000555773 HAAOP46952 286 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF154Q13106 437 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 CTF1Q16619 201 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 DMRTC1Q5HYR2 192 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 DDI2Q5TDH0 399 aa10.55□□□□□ -0.72
SHMT2-221ENST00000555773 ZNF671Q8TAW3 534 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms