RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 NPRL2Q8WTW4 380 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMEM203Q969S6 136 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CHODLQ9H9P2 273 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 FN3KRPQ9HA64 309 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CACNG2Q9Y698 323 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ITPR2Q14571 2701 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PDZD2O15018 2839 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TRBV5-5A0A0J9YX44 114 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 FAM230AA0A1W2PPH8 454 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR5B21A6NL26 309 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMEM210A6NLX4 147 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZNF879B4DU55 563 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 IRF2P14316 349 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ATF1P18846 271 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GATA4P43694 442 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 DSCR9P59020 149 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZNF154Q13106 437 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MPPED2Q15777 294 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 UTS2BQ765I0 119 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 WDR86Q86TI4 376 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PHC2Q8IXK0 858 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PARP16Q8N5Y8 322 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR13C9Q8NGT0 318 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR11L1Q8NGX0 322 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 THRSPQ92748 146 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ERGIC1Q969X5 290 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZCCHC4Q9H5U6 513 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMEM106BQ9NUM4 274 aa12.24□□□□□ -0.45
TNFRSF1A-216ENST00000543995 A0A1W2PPK0 400 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 hCG_1807616A0A1W2PRN6 198 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 LRRC30A6NM36 301 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MAPK3P27361 379 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TRAM1Q15629 374 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TGIF2LYQ8IUE0 185 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 HPS1Q92902 700 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 BORCS8Q96FH0 119 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 Q96MF0 132 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 FGF23Q9GZV9 251 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 NEK6Q9HC98 313 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 C1orf123Q9NWV4 160 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TAS2R4Q9NYW5 299 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CKLFQ9UBR5 152 aa12.23□□□□□ -0.45
TNFRSF1A-216ENST00000543995 LRP5LA4QPB2 252 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CLDN25C9JDP6 229 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CCRL2O00421 344 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CDIPTO14735 213 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PPIHO43447 177 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RP2O75695 350 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PTBP3O95758 552 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RAB3AP20336 220 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PRKACBP22694 351 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 AZGP1P25311 298 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PSMA1P25786 263 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GABRA5P31644 462 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RBMXP38159 391 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 HAAOP46952 286 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 FUT6P51993 359 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RPS25P62851 125 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PPP3R1P63098 170 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 HNRNPA0Q13151 305 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 INSL4Q14641 139 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SSX1Q16384 188 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ACSM3Q53FZ2 586 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SYT6Q5T7P8 510 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZNF826PQ6ZT77 177 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PEG10Q86TG7 708 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZNF573Q86YE8 665 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 KRTAP1-3Q8IUG1 177 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RPL3LQ92901 407 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ORAI1Q96D31 301 aa12.22□□□□□ -0.45
TNFRSF1A-216ENST00000543995 IGKV1-9A0A0C4DH69 117 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PQLC2LA1A4F0 135 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 IFNL4K9M1U5 179 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 NDUFS8O00217 210 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MAGEB3O15480 346 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SULT1B1O43704 296 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CYB5R3P00387 301 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 HCKP08631 526 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMEM33P57088 247 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CEACAM19Q7Z692 300 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SCCPDHQ8NBX0 429 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 WFDC11Q8NEX6 87 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MUL1Q969V5 352 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SPSB1Q96BD6 273 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TIMD4Q96H15 378 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 DERL3Q96Q80 235 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 NDUFB11Q9NX14 153 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PRRC2AP48634 2157 aaKnown RBP12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IGHV4-30-2A0A087WSY4 118 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MAGEA13PA6NCF6 341 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GIFP27352 417 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TGFBR2P37173 567 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PMELP40967 661 aa12.21□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GPR6P46095 362 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms