RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SKA3Q8IX90 412 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 SPAG16Q8N0X2 631 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 Q8NFD4 153 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 SCARB1Q8WTV0 552 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 WBP1Q96G27 269 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 PFDN5Q99471 154 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 FOXB1Q99853 325 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 VRK1Q99986 396 aaPredicted RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 C7orf50Q9BRJ6 194 aaKnown RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 PAPOLGQ9BWT3 736 aaKnown RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 ULBP2Q9BZM5 246 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF107Q9UII5 783 aaPredicted RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 KLK13Q9UKR3 277 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 MEIKINA0A087WXM9 373 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 LOC100289279A0A1B0GTE1 492 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 C7orf66A4D0T2 115 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 MEGF11A6BM72 1044 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 MPTX1A8MV57 137 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 GABARAPH6UMI1 98 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SULT1C2O00338 296 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 IL18BPO95998 194 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 F10P00742 488 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 CGAP01215 116 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 THBS4P35443 961 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF84P51523 738 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 ZP1P60852 638 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 PSG4Q00888 419 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OC90Q02509 493 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 UNC119Q13432 240 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 DAZAP2Q15038 168 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SSX2Q16385 188 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 AAED1Q7RTV5 226 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 DPPA2Q7Z7J5 298 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SERPINA12Q8IW75 414 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TAAR6Q96RI8 345 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 THAP7Q9BT49 309 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 CACNG6Q9BXT2 260 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 NOX3Q9HBY0 568 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 MED9Q9NWA0 146 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 hCG_38984A0A1B0GV85 526 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 A0A1W2PPK0 400 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 FAM166BA8MTA8 275 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 P2RY10O00398 339 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 DHRS3O75911 302 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 WISP2O76076 250 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 BPNT1O95861 308 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TCRBP04435 133 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SPP1P10451 314 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SDHBP21912 280 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 GIFP27352 417 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 EIF1AXP47813 144 aaKnown RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 EFNB2P52799 333 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 DEFA6Q01524 100 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SMCO1Q147U7 214 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SFRP5Q5T4F7 317 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 PGAP1Q75T13 922 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR2W3Q7Z3T1 314 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TUSC5Q8IXB3 177 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 RBMXL3Q8N7X1 1067 aaKnown RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR10H5Q8NGA6 315 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 AQP3Q92482 292 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 CHST5Q9GZS9 411 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 ARL6Q9H0F7 186 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SLC7A10Q9NS82 523 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 UFSP2Q9NUQ7 469 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SLC5A6Q9Y289 635 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 KCNK7Q9Y2U2 307 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 NUBP2Q9Y5Y2 271 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TRGV5A0A0B4J1U4 118 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 ANKRD20A5PA0PJZ0 165 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR14I1A6ND48 311 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TMIGD3P0DMS9 266 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 RAG2P55895 527 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 PITPNAQ00169 270 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SNAI3Q3KNW1 292 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SEM1Q6ZVN7 128 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 SSX9Q7RTT3 188 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 NUFIP2Q7Z417 695 aaKnown RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 FAM89BQ8N5H3 189 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 CPEB3Q8NE35 698 aaKnown RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 DNAAF1Q8NEP3 725 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR13C3Q8NGS6 347 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR2AJ1Q8NGZ0 328 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR1F12Q8NHA8 337 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 GMPPAQ96IJ6 420 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-212ENST00000535941 OR51M1Q9H341 326 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 CALHM2Q9HA72 323 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TCF7L1Q9HCS4 588 aa6.95□□□□□ -1.3
COL21A1-212ENST00000535941 TRAV17A0A0B4J275 112 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 H2AFB2P0C5Z0 115 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 SNRPEP62304 92 aaKnown RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 FAM74A1Q5RGS3 127 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 AVPI1Q5T686 147 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 ELP2Q6IA86 826 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 RNF144BQ7Z419 303 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 NAA40Q86UY6 237 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TMEM17Q86X19 198 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 OR4D6Q8NGJ1 314 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 BCL2L2Q92843 193 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MRPS24Q96EL2 167 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms