RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 GATAD2BQ8WXI9 593 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 RGP1Q92546 391 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-206ENST00000531480 DVL3Q92997 716 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-206ENST00000531480 MUL1Q969V5 352 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 PDCD1LG2Q9BQ51 273 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 REG4Q9BYZ8 158 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 BPESC1Q9GZL8 116 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 CHST5Q9GZS9 411 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 C14orf119Q9NWQ9 140 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 TRBV2A0A0J9YWF9 115 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 TMEM210A6NLX4 147 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 ANXA2P2A6NMY6 339 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 PLPP2O43688 288 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 LMX1BO60663 402 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 CDC14BO60729 498 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 NRASP01111 189 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 HSMCR30P0CW71 290 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 CD99P14209 185 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 PCMT1P22061 227 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 PSMA1P25786 263 aaKnown RBP12.19□□□□□ -0.46
CPSF1-206ENST00000531480 THBS2P35442 1172 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 TMBIM6P55061 237 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 SLC3A1Q07837 685 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 MLLT11Q13015 90 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-206ENST00000531480 ZNF154Q13106 437 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 MPPED2Q15777 294 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 UTS2BQ765I0 119 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-206ENST00000531480 ZNF676Q8N7Q3 588 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 OR5A2Q8NGI9 324 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 OR51A4Q8NGJ6 313 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 OR8S1Q8NH09 359 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 RAB2BQ8WUD1 216 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 PP6455Q8WZ26 134 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 PIGCQ92535 297 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 THRSPQ92748 146 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 UFD1Q92890 307 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 MGLLQ99685 303 aa12.19□□□□□ -0.46
CPSF1-206ENST00000531480 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 A6NHS1 94 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 OR5B21A6NL26 309 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 CLDN25C9JDP6 229 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 CCRL2O00421 344 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 ALX3O95076 343 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 LHBP01229 141 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 GPR6P46095 362 aaPredicted RBP12.18□□□□□ -0.46
CPSF1-206ENST00000531480 RPS11P62280 158 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPSF1-206ENST00000531480 ARMCX4Q5H9R4 360 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 PRAMEF6Q5VXH4 476 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 MOGAT3Q86VF5 341 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 PARP16Q8N5Y8 322 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 CCL17Q92583 94 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 ADAT3Q96EY9 351 aaPredicted RBP12.18□□□□□ -0.46
CPSF1-206ENST00000531480 C18orf12Q96KH6 178 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 TECTBQ96PL2 329 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 RTL8AQ9BWD3 113 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 COMMD4Q9H0A8 199 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 DCAF16Q9NXF7 216 aa12.18□□□□□ -0.46
CPSF1-206ENST00000531480 MTORP42345 2549 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 TRBV5-5A0A0J9YX44 114 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 PQLC2LA1A4F0 135 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 DPPA5A6NC42 116 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 ANKRD61A6NGH8 418 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 H7C1Q1 480 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 SERPINA3P01011 423 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 IGHV2-70P01814 119 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-206ENST00000531480 GNG3P63215 75 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 UBE2V2Q15819 145 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 ZNF529Q6P280 563 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 MS4A15Q8N5U1 240 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 OR13F1Q8NGS4 319 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 GHSRQ92847 366 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 HPS1Q92902 700 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 OR5M11Q96RB7 305 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 FN3KRPQ9HA64 309 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 PLEKHA1Q9HB21 404 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 ZNF281Q9Y2X9 895 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 WIPI2Q9Y4P8 454 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 NPTNQ9Y639 398 aa12.17□□□□□ -0.46
CPSF1-206ENST00000531480 IGKV1-9A0A0C4DH69 117 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 PPIHO43447 177 aaKnown RBP12.16□□□□□ -0.46
CPSF1-206ENST00000531480 GATBO75879 557 aaKnown RBP12.16□□□□□ -0.46
CPSF1-206ENST00000531480 GALP22466 123 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 MAP2K4P45985 399 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 HNRNPA0Q13151 305 aaKnown RBP12.16□□□□□ -0.46
CPSF1-206ENST00000531480 CARTPTQ16568 116 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 YIF1BQ5BJH7 314 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 CEP78Q5JTW2 689 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms