RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 LHFPL1Q86WI0 220 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 TMEM105Q8N8V8 129 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 NPRL2Q8WTW4 380 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 PPP1R1CQ8WVI7 109 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 RBPMSQ93062 196 aaKnown RBP13.41□□□□□ -0.26
USH1C-207ENST00000527720 SHPKQ9UHJ6 478 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 PRKACBP22694 351 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 CNN3Q15417 329 aaKnown RBP13.41□□□□□ -0.26
USH1C-207ENST00000527720 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 ALKAL2Q6UX46 152 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 GALNTL5Q7Z4T8 443 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 DTX1Q86Y01 620 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 OR5M9Q8NGP3 310 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 ROBO4Q8WZ75 1007 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 TCEAL3Q969E4 200 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 TMEM45BQ96B21 275 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 ZNF775Q96BV0 537 aaPredicted RBP13.41□□□□□ -0.26
USH1C-207ENST00000527720 WBP1Q96G27 269 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 REEP6Q96HR9 211 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 NECAB3Q96P71 396 aaPredicted RBP13.41□□□□□ -0.26
USH1C-207ENST00000527720 FOXB1Q99853 325 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 RGCCQ9H4X1 137 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 TIMM10BQ9Y5J6 103 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 ZDBF2Q9HCK1 2354 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 CFAP54Q96N23 3096 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 CCSO14618 274 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 OR3A2P47893 321 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 CYCSP99999 105 aaKnown RBP13.4□□□□□ -0.26
USH1C-207ENST00000527720 FOXO1Q12778 655 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 NRN1LQ496H8 165 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 ZNF774Q6NX45 483 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 ACOT7LQ6ZUV0 252 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 PIGTQ969N2 578 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 GPR87Q9BY21 358 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 ARRDC1-AS1Q9H2J1 176 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 NUP50Q9UKX7 468 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 VPS13AQ96RL7 3174 aa13.4□□□□□ -0.26
USH1C-207ENST00000527720 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 HPNP05981 417 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 ZNF32P17041 273 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 RGS19P49795 217 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 SNU13P55769 128 aaKnown RBP13.39□□□□□ -0.27
USH1C-207ENST00000527720 ZNF100Q8IYN0 542 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 COQ8AQ8NI60 647 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 CASTOR1Q8WTX7 329 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 C17orf50Q8WW18 174 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 REG4Q9BYZ8 158 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 NMES1Q9C002 83 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 C5orf66Q9H5L9 145 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 LRFN1Q9P244 771 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 PFDN2Q9UHV9 154 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 MFSD2BA6NFX1 497 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 M6PRP20645 277 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 AVPR2P30518 371 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 STARP49675 285 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 CLDN15P56746 228 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 SURF2Q15527 256 aaPredicted RBP13.39□□□□□ -0.27
USH1C-207ENST00000527720 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 OR5AP2Q8NGF4 316 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 THAP6Q8TBB0 222 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 LRRC20Q8TCA0 184 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 SEC22AQ96IW7 307 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 THOC3Q96J01 351 aaKnown RBP13.39□□□□□ -0.27
USH1C-207ENST00000527720 LOXL4Q96JB6 756 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 Q96M66 194 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 ALKBH3Q96Q83 286 aaPredicted RBP13.39□□□□□ -0.27
USH1C-207ENST00000527720 FAM173AQ9BQD7 235 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 FAM117AQ9C073 453 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 METTL9Q9H1A3 318 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 SLC25A32Q9H2D1 315 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 SDHAF2Q9NX18 166 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 OSGIN2Q9Y236 505 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 SESN1Q9Y6P5 492 aa13.39□□□□□ -0.27
USH1C-207ENST00000527720 C21orf140B9A014 251 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 C9orf172C9J069 976 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 BCL2L11O43521 198 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 SFT2D2O95562 160 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 LCATP04180 440 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 B4GALT1P15291 398 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 ACKR3P25106 362 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 ECI1P42126 302 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 HTR5AP47898 357 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 ATP1B3P54709 279 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 MTCP1P56278 107 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 PLXDC2Q6UX71 529 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 LHFPL2Q6ZUX7 228 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 KCTD9Q7L273 389 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 PDZD9Q8IXQ8 264 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 OR10K1Q8NGX5 313 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 CDC6Q99741 560 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 ST6GALNAC5Q9BVH7 336 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 OR2H1Q9GZK4 316 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 ELL3Q9HB65 397 aaPredicted RBP13.38□□□□□ -0.27
USH1C-207ENST00000527720 GPR173Q9NS66 373 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 FRYLO94915 3013 aa13.38□□□□□ -0.27
USH1C-207ENST00000527720 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms