RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 SURF2Q15527 256 aaPredicted RBP18.61■□□□□ 0.57
VPS28-205ENST00000526204 STPG2Q8N412 459 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 OR5AP2Q8NGF4 316 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 OR13G1Q8NGZ3 307 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 LHFPL5Q8TAF8 219 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 RHBDD1Q8TEB9 315 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 DCUN1D4Q92564 292 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 NECAB3Q96P71 396 aaPredicted RBP18.61■□□□□ 0.57
VPS28-205ENST00000526204 RTBDNQ9BSG5 229 aaPredicted RBP18.61■□□□□ 0.57
VPS28-205ENST00000526204 OSGIN2Q9Y236 505 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 DHRS7CA6NNS2 312 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 SERPINA2P20848 420 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 PPIAP62937 165 aaKnown RBP18.61■□□□□ 0.57
VPS28-205ENST00000526204 AADACL3Q5VUY0 350 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 PIK3IP1Q96FE7 263 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 SGCZQ96LD1 299 aa18.61■□□□□ 0.57
VPS28-205ENST00000526204 A0A0J9YW62 118 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 F8VVB4 439 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 F8VWA3 439 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 TNFSF11O14788 317 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 HPNP05981 417 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 CCL4P13236 92 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 PGAM2P15259 253 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 NAAAQ02083 359 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 PLEKHN1Q494U1 663 aaPredicted RBP18.6■□□□□ 0.57
VPS28-205ENST00000526204 RNF126Q9BV68 326 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 PIGMQ9H3S5 423 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 EHFQ9NZC4 300 aa18.6■□□□□ 0.57
VPS28-205ENST00000526204 FIGNL2A6NMB9 653 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 G3V3Y1 287 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 TPT1P13693 172 aaKnown RBP18.59■□□□□ 0.57
VPS28-205ENST00000526204 FOLR3P41439 243 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 ECI1P42126 302 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 RAC3P60763 192 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 SUPT4H1P63272 117 aaKnown RBP18.59■□□□□ 0.57
VPS28-205ENST00000526204 SLC9A3R2Q15599 337 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 CHRFAM7AQ494W8 412 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 ELP2Q6IA86 826 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 DRAM2Q6UX65 266 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 EMG1Q92979 244 aaKnown RBP18.59■□□□□ 0.57
VPS28-205ENST00000526204 TSPAN4O14817 238 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 PRKACBP22694 351 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 DMRTC1Q5HYR2 192 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 SPSB1Q96BD6 273 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 FBXO17Q96EF6 278 aa18.59■□□□□ 0.57
VPS28-205ENST00000526204 CPNE2Q96FN4 548 aaPredicted RBP18.59■□□□□ 0.57
VPS28-205ENST00000526204 ELL3Q9HB65 397 aaPredicted RBP18.59■□□□□ 0.57
VPS28-205ENST00000526204 LYL1P12980 280 aa18.58■□□□□ 0.57
VPS28-205ENST00000526204 RAB35Q15286 201 aa18.58■□□□□ 0.57
VPS28-205ENST00000526204 UQCC3Q6UW78 93 aa18.58■□□□□ 0.57
VPS28-205ENST00000526204 ZBTB44Q8NCP5 570 aa18.58■□□□□ 0.57
VPS28-205ENST00000526204 SEMA6DQ8NFY4 1073 aa18.58■□□□□ 0.57
VPS28-205ENST00000526204 IGHEP01854 428 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 DBHP09172 617 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 PRSS54Q6PEW0 395 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 UNQ6126/PRO20091Q6UXV3 157 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 KCNE4Q8WWG9 221 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 MARC2Q969Z3 335 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 SGK3Q96BR1 496 aa18.58■□□□□ 0.56
VPS28-205ENST00000526204 SDCBPO00560 298 aaPredicted RBP18.57■□□□□ 0.56
VPS28-205ENST00000526204 HTR3BO95264 441 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 APOC3P02656 99 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 PET100P0DJ07 73 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 PI3P19957 117 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 CRYGSP22914 178 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 SRD5A2P31213 254 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 ANKRD55Q3KP44 614 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 GALNTL5Q7Z4T8 443 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 GPR137CQ8N3F9 429 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 SLC30A7Q8NEW0 376 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 PIGTQ969N2 578 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 SRXN1Q9BYN0 137 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 FAM117AQ9C073 453 aa18.57■□□□□ 0.56
VPS28-205ENST00000526204 MS4A7Q9GZW8 240 aaPredicted RBP18.57■□□□□ 0.56
VPS28-205ENST00000526204 METTL8Q9H825 291 aaKnown RBP18.57■□□□□ 0.56
VPS28-205ENST00000526204 SGCEO43556 437 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 ADAP1O75689 374 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 PEAR1Q5VY43 1037 aaPredicted RBP18.56■□□□□ 0.56
VPS28-205ENST00000526204 DTX1Q86Y01 620 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 SULF2Q8IWU5 870 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 BAP18Q8IXM2 172 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 ZC3H10Q96K80 434 aaKnown RBP18.56■□□□□ 0.56
VPS28-205ENST00000526204 C2orf50Q96LR7 162 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 PLEKHJ1Q9NW61 149 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 C14orf166Q9Y224 244 aaKnown RBP18.56■□□□□ 0.56
VPS28-205ENST00000526204 PI4KAP42356 2102 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 RAB19A4D1S5 217 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 RRP8O43159 456 aaKnown RBP18.56■□□□□ 0.56
VPS28-205ENST00000526204 CER1O95813 267 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 P04436 131 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 CST2P09228 141 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 GLRA1P23415 457 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 MTCP1P56278 107 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 SNAI3Q3KNW1 292 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 ZNF837Q96EG3 531 aaPredicted RBP18.56■□□□□ 0.56
VPS28-205ENST00000526204 Q96M66 194 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 CDX2Q99626 313 aaPredicted RBP18.56■□□□□ 0.56
VPS28-205ENST00000526204 EDARQ9UNE0 448 aa18.56■□□□□ 0.56
VPS28-205ENST00000526204 H0YIZ8 118 aa18.55■□□□□ 0.56
VPS28-205ENST00000526204 FGF16O43320 207 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms