RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ECH1Q13011 328 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 TMED1Q13445 227 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 GINS1Q14691 196 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 PTGES3Q15185 160 aaKnown RBP5.39□□□□□ -1.55
CD44-221ENST00000526000 PCK2Q16822 640 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 GFOD2Q3B7J2 385 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 KRTAP27-1Q3LI81 207 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 CDONQ4KMG0 1287 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 PLA1AQ53H76 456 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 DMRTC1Q5HYR2 192 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 SLX4IPQ5VYV7 408 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 DPY19L4Q7Z388 723 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 WDR86Q86TI4 376 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 LDLRAD3Q86YD5 345 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 Q8N7P7 452 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 CELF2-AS1Q8N7Q2 184 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 ZNF511Q8NB15 262 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 SETD9Q8NE22 299 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 ZNF555Q8NEP9 628 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 OR8J1Q8NGP2 316 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 OR9Q1Q8NGQ5 310 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 OR8S1Q8NH09 359 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 SGCDQ92629 289 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 HRASLS5Q96KN8 279 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 OR5M11Q96RB7 305 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 SSX3Q99909 188 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 COPS4Q9BT78 406 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 WDR13Q9H1Z4 485 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 EGLN3Q9H6Z9 239 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 ELL3Q9HB65 397 aaPredicted RBP5.39□□□□□ -1.55
CD44-221ENST00000526000 CYB5R1Q9UHQ9 305 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 HSPE1-MOB4S4R3N1 261 aa5.39□□□□□ -1.55
CD44-221ENST00000526000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 LOC100130705A0A1B0GUX0 176 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 A0A1B0GVI7 797 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 A0A1B0GWJ7 208 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ANKRD30BLA7E2S9 258 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 H3BUX3 64 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 J3QW42 95 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 CDIPTO14735 213 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 PIN1P1O15428 100 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 PRODHO43272 600 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 AKR7A2O43488 359 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 TSPAN9O75954 239 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SOX14O95416 240 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 FSTL3O95633 263 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ECDO95905 644 aaPredicted RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 LHBP01229 141 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 GYPBP06028 91 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ANXA2P07355 339 aaKnown RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 SPARCP09486 303 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 VSIG8P0DPA2 414 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SAA4P35542 130 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 RAB13P51153 203 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ERVFRD-1P60508 538 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 HABP2Q14520 560 aaPredicted RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 HERPUD1Q15011 391 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SNAPC1Q16533 368 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 MICBQ29980 383 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SLC35D3Q5M8T2 416 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SLC25A30Q5SVS4 291 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SAMD5Q5TGI4 173 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 MEDAGQ5VYS4 303 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 C12orf73Q69YU5 71 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 KCTD8Q6ZWB6 473 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 FAM57BQ71RH2 274 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 DCXRQ7Z4W1 244 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ZBTB46Q86UZ6 589 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 GID4Q8IVV7 300 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 CMTM4Q8IZR5 234 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 DHRSXQ8N5I4 330 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 KLHDC1Q8N7A1 406 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 LY6G5BQ8NDX9 201 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 PROKR2Q8NFJ6 384 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 OR1M1Q8NGA1 313 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 OR8D4Q8NGM9 314 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 OR2T4Q8NH00 348 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 RPL3LQ92901 407 aaKnown RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 SPTSSAQ969W0 71 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SGK3Q96BR1 496 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 Q96MT0 163 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 MYCBPQ99417 103 aaPredicted RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 SLC29A1Q99808 456 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 APOL4Q9BPW4 351 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 SLC22A4Q9H015 551 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 RIBC2Q9H4K1 309 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 C14orf119Q9NWQ9 140 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 DNAJC27Q9NZQ0 273 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ZNRD1Q9P1U0 126 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 NKX1-2Q9UD57 310 aaPredicted RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 ATPIF1Q9UII2 106 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 KCNG2Q9UJ96 466 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 VPREB3Q9UKI3 123 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 ZNF281Q9Y2X9 895 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 CAB39Q9Y376 341 aaPredicted RBP5.38□□□□□ -1.55
CD44-221ENST00000526000 RHBDD3Q9Y3P4 386 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 GMPPBQ9Y5P6 360 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 KPTNQ9Y664 436 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 CMYA5Q8N3K9 4069 aa5.38□□□□□ -1.55
CD44-221ENST00000526000 A0A1W2PQ09 198 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms