RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 FAM3AP98173 230 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 TLE4Q04727 773 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 FUT7Q11130 342 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ZP4Q12836 540 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 RAB31Q13636 194 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 SHHQ15465 462 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 TNXAQ16473 311 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 PYY3Q5JQD4 70 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 FAM74A1Q5RGS3 127 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 C9orf129Q5T035 196 aaKnown RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 NCMAPQ5T1S8 102 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 C9orf135Q5VTT2 229 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ANKRD22Q5VYY1 191 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 FAM219BQ5XKK7 198 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 TRIQKQ629K1 86 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 SAXO2Q658L1 398 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 PLET1Q6UQ28 207 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 Q6ZRG5 221 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 UNC93AQ86WB7 457 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 SIAH3Q8IW03 269 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ZNF557Q8N988 423 aaPredicted RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 GDPD1Q8N9F7 314 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 SIDT2Q8NBJ9 832 aaKnown RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 OR11H1Q8NG94 326 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 OR5D13Q8NGL4 314 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 OR9Q1Q8NGQ5 310 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 OR11H2Q8NH07 326 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 PIGXQ8TBF5 258 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 GPR151Q8TDV0 419 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ACOT11Q8WXI4 607 aaPredicted RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 SLC7A6Q92536 515 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 GGHQ92820 318 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 EMG1Q92979 244 aaKnown RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 PHYHIPLQ96FC7 376 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 CDKN2AIPNLQ96HQ2 116 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 S1PR3Q99500 378 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 GPA33Q99795 319 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 TMEM43Q9BTV4 400 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 DPH7Q9BTV6 452 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 RSG1Q9BU20 258 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 PAXXQ9BUH6 204 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 COMMD4Q9H0A8 199 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ELOVL6Q9H5J4 265 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 REEP4Q9H6H4 257 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ZDHHC6Q9H6R6 413 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 RNF122Q9H9V4 155 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ROPN1Q9HAT0 212 aaPredicted RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 PDFQ9HBH1 243 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 HMG20AQ9NP66 347 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 RAB18Q9NP72 206 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 MYOZ2Q9NPC6 264 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 ISYNA1Q9NPH2 558 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 SLC2A9Q9NRM0 540 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 NECAP2Q9NVZ3 263 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 PLEKHJ1Q9NW61 149 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 IFNKQ9P0W0 207 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 PITPNC1Q9UKF7 332 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 NXT1Q9UKK6 140 aaKnown RBP2.78□□□□□ -1.96
CD44-217ENST00000525348 RAB26Q9ULW5 256 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 TRPM1Q7Z4N2 1603 aa2.78□□□□□ -1.96
CD44-217ENST00000525348 TRPM3Q9HCF6 1732 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 ABCB11O95342 1321 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ALS2Q96Q42 1657 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 FAM240BA0A1B0GVZ2 78 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 H3BNH8 94 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 H7C417 338 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 GFYI3L273 518 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PDXKO00764 312 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 GOSR2O14653 212 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 MAGEB4O15481 346 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 HPGDSO60760 199 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR2B3O76000 313 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 VAPBO95292 243 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CPNE6O95741 557 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 NDUFB10O96000 172 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR8U8P0C7N1 319 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR8U9P0C7N5 309 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 SLC35G4P0C7Q5 338 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 C1GALT1C1LP0DN25 315 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 TSPAN8P19075 237 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CXCR1P25024 350 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 GDF1P27539 372 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ADORA1P30542 326 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 KDELR2P33947 212 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ACVR1BP36896 505 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 RFX3P48380 749 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PPOXP50336 477 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 TNFSF10P50591 281 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CDKN2DP55273 166 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 RAB2AP61019 212 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 DYNLL1P63167 89 aaKnown RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 RPL19P84098 196 aaKnown RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 CSTF1Q05048 431 aaKnown RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 CD47Q08722 323 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ZNF616Q08AN1 781 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 SLC10A7Q0GE19 358 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 TWF1Q12792 350 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PRPSAP1Q14558 356 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CYP51A1Q16850 503 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms