RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 NOX3Q9HBY0 568 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 DYRK4Q9NR20 520 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 CHRAC1Q9NRG0 131 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 KPTNQ9Y664 436 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 TANC1Q9C0D5 1861 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF532Q9HCE3 1301 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 PAPPA2Q9BXP8 1791 aa2.15□□□□□ -2.06
HMGN1P28-201ENST00000521340 CITO14578 2027 aa2.15□□□□□ -2.06
HMGN1P28-201ENST00000521340 TSC2P49815 1807 aa2.15□□□□□ -2.06
HMGN1P28-201ENST00000521340 IGKV1-27A0A075B6S5 117 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 ERICH4A6NGS2 130 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 DNASE2O00115 360 aaPredicted RBP2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 CTNSO60931 367 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 DEXIO95424 95 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 GYPCP04921 128 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 FABP3P05413 133 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 TPM1P09493 284 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 CALM1P0DP23 149 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 CALM2P0DP24 149 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 CALM3P0DP25 149 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 THRAP10827 490 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 ERGP11308 486 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 RAB3AP20336 220 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 PMCHP20382 165 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 NOVP48745 357 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 GFERP55789 205 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 CLDN6P56747 220 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 RPS23P62266 143 aaKnown RBP2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 TRDNQ13061 729 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 IFT88Q13099 833 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 WHAMMP3Q1A5X7 153 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 ZNF829Q3KNS6 432 aaPredicted RBP2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 LIN9Q5TKA1 542 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 METTL21CQ5VZV1 264 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 Q5W150 140 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 ABHD12BQ7Z5M8 362 aaPredicted RBP2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR6Q1Q8NGQ2 317 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 ABHD3Q8WU67 409 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 CCDC12Q8WUD4 166 aaPredicted RBP2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 BTN2A3PQ96KV6 586 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 MAP1LC3CQ9BXW4 147 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 SPNS1Q9H2V7 528 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 LHX9Q9NQ69 397 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 STMN3Q9NZ72 180 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 UVRAGQ9P2Y5 699 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 WSB1Q9Y6I7 421 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 OTOFQ9HC10 1997 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 ARID1AO14497 2285 aa2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 DICER1Q9UPY3 1922 aaKnown RBP2.15□□□□□ -2.07
HMGN1P28-201ENST00000521340 MCM3APO60318 1980 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PLIN4Q96Q06 1357 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PLXNA1Q9UIW2 1896 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 IGHV5-10-1A0A0J9YXX1 117 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PDZK1P1A8MUH7 402 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 INS-IGF2F8WCM5 200 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 H0Y9J4 135 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 NDUFS8O00217 210 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 ANGPTL7O43827 346 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 SHOX2O60902 331 aaPredicted RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 MPDU1O75352 247 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 CA11O75493 328 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 VAPBO95292 243 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 LCA5LO95447 670 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 ADRB3P13945 408 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 IGFBP3P17936 291 aaPredicted RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 WARSP23381 471 aaKnown RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 LOXP28300 417 aaPredicted RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 CASQ1P31415 396 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 KIR3DL2P43630 455 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 CYB561P49447 251 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PSMD4P55036 377 aaKnown RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR2B8PP59922 312 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 GNG11P61952 73 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 ESRRGP62508 458 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 VSNL1P62760 191 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 RPL18AQ02543 176 aaKnown RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 MECOMQ03112 1051 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 LOXL1Q08397 574 aaPredicted RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLAQ13239 276 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 DGCR6Q14129 220 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 THEM4Q5T1C6 240 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PRMT9Q6P2P2 845 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 Q6P435 159 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 FAM58AQ8N1B3 248 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLC35F6Q8N357 371 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 ASCC1Q8N9N2 400 aaKnown RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 CCDC54Q8NEL0 328 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR6N1Q8NGY5 312 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 OR51E1Q8TCB6 317 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PIFOQ8TCI5 191 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 C15orf40Q8WUR7 153 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 LRRC39Q96DD0 335 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 C19orf60Q96EN9 201 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 CEP170P1Q96L14 293 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 GPR21Q99679 349 aa2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 NAPGQ99747 312 aaPredicted RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLC25A39Q9BZJ4 359 aaPredicted RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 SLIRPQ9GZT3 109 aaKnown RBP2.14□□□□□ -2.07
HMGN1P28-201ENST00000521340 PARP12Q9H0J9 701 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms