RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 LRRC3CA6NJW4 275 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 NKX2-8O15522 239 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 IL5P05113 134 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 DUSP1P28562 367 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 ATP1B3P54709 279 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 PPP1R1AQ13522 171 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 RAB35Q15286 201 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 OR5AS1Q8N127 324 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 BOLLQ8N9W6 283 aaKnown RBP9.95□□□□□ -0.82
CLK4-206ENST00000520878 OR51F2Q8NH61 342 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 SF3B5Q9BWJ5 86 aaKnown RBP9.95□□□□□ -0.82
CLK4-206ENST00000520878 COQ3Q9NZJ6 369 aa9.95□□□□□ -0.82
CLK4-206ENST00000520878 EIF3IQ13347 325 aaKnown RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 EXOSC2Q13868 293 aaKnown RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 ZNF260Q3ZCT1 412 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 DRAM2Q6UX65 266 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 HDHD3Q9BSH5 251 aaPredicted RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 FAAP24Q9BTP7 215 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 TMPRSS13Q9BYE2 586 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 OR2S2Q9NQN1 319 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 KLF13Q9Y2Y9 288 aaPredicted RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 A0A0A6YYH2 397 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 KANTRA0A1W2PQU2 76 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 A6NJ64 397 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 SRSF10O75494 262 aaKnown RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 RAB6AP20340 208 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 THBS4P35443 961 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 RRADP55042 308 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 RAB1AP62820 205 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 ZNF239Q16600 458 aaKnown RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 SPIN3Q5JUX0 258 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 PSMF1Q92530 271 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 DDA1Q9BW61 102 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 PCNX1Q96RV3 2341 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 IGKV1-9A0A0C4DH69 117 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 OR2AT4A6NND4 320 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 F5H0A9 414 aaPredicted RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 SEC61A1P61619 476 aaKnown RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 STK11Q15831 433 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 TEX261Q6UWH6 196 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 SLC25A26Q70HW3 274 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 TMEM123Q8N131 208 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 FBXL14Q8N1E6 418 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 OR5M9Q8NGP3 310 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 DYRK2Q92630 601 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 CPNE2Q96FN4 548 aaPredicted RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 CYYR1Q96J86 154 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 RBM7Q9Y580 266 aaKnown RBP9.94□□□□□ -0.82
CLK4-206ENST00000520878 U3KQ87 197 aa9.94□□□□□ -0.82
CLK4-206ENST00000520878 C21orf140B9A014 251 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 UBBP0CG47 229 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 NTF4P34130 210 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 LIX1LQ8IVB5 337 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 FGFBP3Q8TAT2 258 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 LUZP4Q9P127 313 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 DKK1O94907 266 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 APLNRP35414 380 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 RBMXP38159 391 aaKnown RBP9.93□□□□□ -0.82
CLK4-206ENST00000520878 FOXG1P55316 489 aaPredicted RBP9.93□□□□□ -0.82
CLK4-206ENST00000520878 H2BFSP57053 126 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ZBTB37Q5TC79 503 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 GSG1LQ6UXU4 331 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ADAD2Q8NCV1 583 aaKnown RBP9.93□□□□□ -0.82
CLK4-206ENST00000520878 TMEM54Q969K7 222 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 OR2H1Q9GZK4 316 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ETV2O00321 342 aaPredicted RBP9.93□□□□□ -0.82
CLK4-206ENST00000520878 NEURL1O76050 574 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ZNF883P0CG24 379 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 PRKACBP22694 351 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ZNF92Q03936 586 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ZMYND11Q15326 602 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 MICBQ29980 383 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 ZNF766Q5HY98 468 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
CLK4-206ENST00000520878 FAM166AQ6J272 317 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 LYZL4Q96KX0 146 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 SCGB3A2Q96PL1 93 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 PTTG3PQ9NZH4 202 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 VSIG4Q9Y279 399 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 DOCK10Q96BY6 2186 aa9.93□□□□□ -0.82
CLK4-206ENST00000520878 OR6C6A6NF89 314 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 PPP3CBP16298 524 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 ACKR3P25106 362 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 HOXC12P31275 282 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 S100A11P31949 105 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 HLXQ14774 488 aaPredicted RBP9.92□□□□□ -0.82
CLK4-206ENST00000520878 DEFB109BQ30KR1 87 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 C10orf128Q5T292 105 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 OR56B2PQ8NGI1 322 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 PNRC2Q9NPJ4 139 aaKnown RBP9.92□□□□□ -0.82
CLK4-206ENST00000520878 ST3GAL6Q9Y274 331 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 POLEQ07864 2286 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 KCNAB3O43448 404 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 RAD51DO75771 328 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 TPOP07202 933 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 SP1P08047 785 aa9.92□□□□□ -0.82
CLK4-206ENST00000520878 GSTP1P09211 210 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms