RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 HEATR5AQ86XA9 2040 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 K7N7A8 449 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 DVL1O14640 695 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 CDC14BO60729 498 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 APBB3O95704 486 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 RAB4AP20338 218 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 FGF7P21781 194 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 TAGLN2P37802 199 aaKnown RBP14.05□□□□□ -0.16
SCLT1-208ENST00000506368 ARFRP1Q13795 201 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 GAMTQ14353 236 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 KIF26BQ2KJY2 2108 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 KHDC3LQ587J8 217 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 C1QL3Q5VWW1 255 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 SLC26A10Q8NG04 563 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 RNASEH2CQ8TDP1 164 aaKnown RBP14.05□□□□□ -0.16
SCLT1-208ENST00000506368 RNF133Q8WVZ7 376 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 TVP23CQ96ET8 276 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 DECR2Q9NUI1 292 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 KIAA1456Q9P272 454 aa14.05□□□□□ -0.16
SCLT1-208ENST00000506368 A0A0J9YY10 115 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 RBFOX3A6NFN3 312 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 ZNF726A6NNF4 738 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 SERPINE3A8MV23 424 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 C11orf98E9PRG8 122 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 H3BQ15 152 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 GLRA1P23415 457 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 UBE2KP61086 200 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 MESP2Q0VG99 397 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 GAB4Q2WGN9 574 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 PLAC9Q5JTB6 97 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 STT3BQ8TCJ2 826 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 RCC1LQ96I51 464 aaKnown RBP14.04□□□□□ -0.16
SCLT1-208ENST00000506368 FAM206AQ9NX38 181 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 EHFQ9NZC4 300 aa14.04□□□□□ -0.16
SCLT1-208ENST00000506368 SMCO3A2RU48 225 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 NPIPB13A6NJU9 1138 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 NPIPB4C9JG80 1138 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 HSPB1P04792 205 aaKnown RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 HEXBP07686 556 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 ZNF20P17024 532 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 NDUFB7P17568 137 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 PTGER4P35408 488 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 GLIPR1P48060 266 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 CSNK2A1P68400 391 aaPredicted RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 ZNF266Q14584 549 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 AKR1C8PQ5T2L2 129 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 GLIPR1L1Q6UWM5 242 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 CLEC9AQ6UXN8 241 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 MARCH3Q86UD3 253 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 FOXRED2Q8IWF2 684 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 SULF2Q8IWU5 870 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 FAM89BQ8N5H3 189 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 CSNK2A3Q8NEV1 391 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 OR10G4Q8NGN3 311 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 OR6X1Q8NH79 312 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 Q8WTZ3 238 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 RAB39BQ96DA2 213 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 SLC46A1Q96NT5 459 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 PRTFDC1Q9NRG1 225 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 COA3Q9Y2R0 106 aaPredicted RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 LSM5Q9Y4Y9 91 aaKnown RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 OTOL1A6NHN0 477 aaPredicted RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 CRYM-AS1A6NIL9 109 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 MASP2O00187 686 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 MPIG6BO95866 241 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 TTRP02766 147 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 SNU13P55769 128 aaKnown RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 LSM6P62312 80 aaKnown RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 GGNBP1Q5YKI7 109 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 CBLN3Q6UW01 205 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.03□□□□□ -0.16
SCLT1-208ENST00000506368 LRTM2Q8N967 370 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 ZNF248Q8NDW4 579 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 NICN1Q9BSH3 213 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 SMIM3Q9BZL3 60 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 FGF22Q9HCT0 170 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 PITPNC1Q9UKF7 332 aa14.03□□□□□ -0.16
SCLT1-208ENST00000506368 A0A0A6YYD4 124 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 PI3P19957 117 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 FOXK1P85037 733 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 PNRC1Q12796 327 aaPredicted RBP14.02□□□□□ -0.16
SCLT1-208ENST00000506368 JOSD1Q15040 202 aaPredicted RBP14.02□□□□□ -0.16
SCLT1-208ENST00000506368 PDGFRLQ15198 375 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 CHRFAM7AQ494W8 412 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 APCDD1LQ8NCL9 501 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 OR2I1PQ8NGU4 316 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 HPSE2Q8WWQ2 592 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 ERGIC1Q969X5 290 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 ELSPBP1Q96BH3 223 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 ADAT3Q96EY9 351 aaPredicted RBP14.02□□□□□ -0.16
SCLT1-208ENST00000506368 NIPSNAP3BQ9BS92 247 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 GPR61Q9BZJ8 451 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 OR10A2Q9H208 303 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 PTGES2Q9H7Z7 377 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 ZDHHC8Q9ULC8 765 aa14.02□□□□□ -0.16
SCLT1-208ENST00000506368 UTS2O95399 124 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 SOD3P08294 240 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 PGCP20142 388 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 TMEM50BP56557 158 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms