RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 MOB3CQ70IA8 216 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 SPERTQ8NA61 448 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 OR13C5Q8NGS8 318 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 UBASH3BQ8TF42 649 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 ITLN1Q8WWA0 313 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 RGP1Q92546 391 aaPredicted RBP8.5□□□□□ -1.05
NUP54-203ENST00000504173 FCGR1BQ92637 280 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 FGGYQ96C11 551 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 C10orf35Q96D05 121 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 MEGF10Q96KG7 1140 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 OPALINQ96PE5 141 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 HIST1H2AAQ96QV6 131 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 OR2V2Q96R30 315 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 MICU1Q9BPX6 476 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 C19orf24Q9BVV8 132 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 RTL8AQ9BWD3 113 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 PPP1R3EQ9H7J1 279 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 VCX3AQ9NNX9 186 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 GPR173Q9NS66 373 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 ZNF275Q9NSD4 429 aaPredicted RBP8.5□□□□□ -1.05
NUP54-203ENST00000504173 IL19Q9UHD0 177 aa8.5□□□□□ -1.05
NUP54-203ENST00000504173 ANKRD61A6NGH8 418 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 TRIM64BA6NI03 449 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 CDC14BO60729 498 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 GATBO75879 557 aaKnown RBP8.49□□□□□ -1.05
NUP54-203ENST00000504173 SERPINA3P01011 423 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 HPXP02790 462 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 CD1AP06126 327 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 DAOP14920 347 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 CPEP16870 476 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 TNFRSF1AP19438 455 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 CD200P41217 278 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 GPR50Q13585 617 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 TPBGQ13641 420 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 NEDD8Q15843 81 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 CEP78Q5JTW2 689 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 UBE2UQ5VVX9 321 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 KCTD8Q6ZWB6 473 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 KRT74Q7RTS7 529 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 ITPKCQ96DU7 683 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 ADAT3Q96EY9 351 aaPredicted RBP8.49□□□□□ -1.05
NUP54-203ENST00000504173 TMED9Q9BVK6 235 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 C14orf119Q9NWQ9 140 aa8.49□□□□□ -1.05
NUP54-203ENST00000504173 IGHV1-69-2A0A0G2JMI3 117 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 IGHV3-64DA0A0J9YX35 117 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 TRBV5-5A0A0J9YX44 114 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 INMTO95050 263 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 CD2P06729 351 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 GRPP07492 148 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 OCMP0CE72 109 aaPredicted RBP8.48□□□□□ -1.05
NUP54-203ENST00000504173 RPS11P62280 158 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP54-203ENST00000504173 MRPS11P82912 194 aaKnown RBP8.48□□□□□ -1.05
NUP54-203ENST00000504173 MAB21L1Q13394 359 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 CNN3Q15417 329 aaKnown RBP8.48□□□□□ -1.05
NUP54-203ENST00000504173 CARTPTQ16568 116 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 CEACAM21Q3KPI0 293 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 Q499Y3 187 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 PDLIM3Q53GG5 364 aaPredicted RBP8.48□□□□□ -1.05
NUP54-203ENST00000504173 SPRNQ5BIV9 151 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 DMRTC1Q5HYR2 192 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 PRAMEF6Q5VXH4 476 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 TMEM42Q69YG0 159 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 CLEC2AQ6UVW9 174 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 MOGAT3Q86VF5 341 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 MS4A15Q8N5U1 240 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 ZNF525Q8N782 197 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 CELF2-AS1Q8N7Q2 184 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 HPSE2Q8WWQ2 592 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 OR5P3Q8WZ94 311 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 RDH5Q92781 318 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 TMEM203Q969S6 136 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 TMEM106AQ96A25 262 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 RNF170Q96K19 258 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 TECTBQ96PL2 329 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 MYOZ1Q9NP98 299 aaPredicted RBP8.48□□□□□ -1.05
NUP54-203ENST00000504173 SLC7A11Q9UPY5 501 aa8.48□□□□□ -1.05
NUP54-203ENST00000504173 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.48□□□□□ -1.052e-7■■■■■ 42.4
NUP54-203ENST00000504173 LOC100289279A0A1B0GTE1 492 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR5B21A6NL26 309 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 A6NLC8 198 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 TMEM210A6NLX4 147 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 ZNF879B4DU55 563 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 ZNF732B4DXR9 585 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 LYNX1G3V0Z9 82 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 CSF3P09919 207 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 LYNX1P0DP58 116 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 ATF1P18846 271 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 COL8A2P25067 703 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 MAPK3P27361 379 aaPredicted RBP8.47□□□□□ -1.05
NUP54-203ENST00000504173 THBS2P35442 1172 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 CRYBB2P43320 205 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 PDLIM4P50479 330 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 GPM6AP51674 278 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 RPS25P62851 125 aaKnown RBP8.47□□□□□ -1.05
NUP54-203ENST00000504173 GNG3P63215 75 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 TRAM1Q15629 374 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 UBE2V2Q15819 145 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms