RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 HRASLS2Q9NWW9 162 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 OSER1Q9NX31 292 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PCTPQ9UKL6 214 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 A0A0J9YW62 118 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TMEM269A0A1B0GVZ9 245 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MFNGO00587 321 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 SNAI1O95863 264 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ORM1P02763 201 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 HIST1H1DP16402 221 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 DNASE1L1P49184 302 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 XYLT1Q86Y38 959 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF687Q8N1G0 1237 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TSSK2Q96PF2 358 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ANGPTL4Q9BY76 406 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TLNRD1Q9H1K6 362 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 WDR54Q9H977 334 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 GALPQ9UBC7 116 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 B3GALT5Q9Y2C3 310 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 FNDC3AQ9Y2H6 1198 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 LTN1O94822 1766 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ODAMA1E959 279 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 CYB561D2O14569 222 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 HIST1H1EP10412 219 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 PGAM2P15259 253 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 NMBRP28336 390 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 FCER1GP30273 86 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TM4SF1P30408 202 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 SYPL1Q16563 259 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 SLCO4C1Q6ZQN7 724 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MRPL38Q96DV4 380 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MCEEQ96PE7 176 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ATP5SQ99766 215 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MCRIP2Q9BUT9 160 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 SPANXCQ9NY87 97 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 CACNA1FO60840 1977 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 PPIAL4EA0A075B759 164 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 NRG2O14511 850 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 CATP04040 527 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 IL3P08700 152 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 SLC35E2BP0CK96 405 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 PPIAL4FP0DN26 164 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 PSMB1P20618 241 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TGFBR1P36897 503 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TCTEX1D4Q5JR98 221 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 OR4K1Q8NGD4 311 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 NAA38Q9BRA0 125 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 NMRAL1Q9HBL8 299 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 LPAR3Q9UBY5 353 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 PPIAL4AQ9Y536 164 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 RREB1Q92766 1687 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 IGSF9BQ9UPX0 1349 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TUBGCP6Q96RT7 1819 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TMEM129A0AVI4 362 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MCRIP1C9JLW8 97 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 HLA-DQA2P01906 255 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MPGP29372 298 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 TIA1P31483 386 aaKnown RBP eCLIP5.6□□□□□ -1.511e-6■■■■□ 21.9
CLCN3-204ENST00000504131 KIR2DL1P43626 348 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 PPIAP62937 165 aaKnown RBP5.6□□□□□ -1.51
CLCN3-204ENST00000504131 FAM71E1Q6IPT2 247 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 LCN15Q6UWW0 184 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 GDF7Q7Z4P5 450 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF429Q86V71 674 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ZDHHC23Q8IYP9 409 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MSLNLQ96KJ4 702 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 EGLN1Q9GZT9 426 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 FGF21Q9NSA1 209 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 ACER3Q9NUN7 267 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 YIPF1Q9Y548 306 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 MTCH2Q9Y6C9 303 aa5.6□□□□□ -1.51
CLCN3-204ENST00000504131 CENPVL1A0A0U1RR11 272 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CENPVL3A0A0U1RRI6 287 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 A0A1B0GWB2 263 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CGB1A6NKQ9 187 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 RS1O15537 224 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 P2RX6O15547 441 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 TNFSF14O43557 240 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 MPC2O95563 127 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 HTR1AP08908 422 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 PRSS56P0CW18 603 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 NTSR1P30989 418 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 RBMXP38159 391 aaKnown RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF136P52737 540 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 PGGT1BP53609 377 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 SNRPD1P62314 119 aaKnown RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 RPS25P62851 125 aaKnown RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CCL7P80098 99 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ZP4Q12836 540 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 HSPB3Q12988 150 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF506Q5JVG8 444 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 B3GNT8Q7Z7M8 397 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 DNAJA3Q96EY1 480 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF300Q96RE9 604 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 FAM124BQ9H5Z6 455 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 SLC2A4RGQ9NR83 387 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 NFAT5O94916 1531 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 B3GAT3O94766 335 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms