RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 DNAH9Q9NYC9 4486 aa13.06□□□□□ -0.32
MUC1-220ENST00000498431 TCRBV5S2A0A599 114 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 NKX6-3A6NJ46 265 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 ANGPTL7O43827 346 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 CLUP10909 449 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 NDUFB7P17568 137 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 SMIM11AP58511 58 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 HABP2Q14520 560 aaPredicted RBP13.05□□□□□ -0.32
MUC1-220ENST00000498431 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 FAM57BQ71RH2 274 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 GNPDA2Q8TDQ7 276 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 SGCDQ92629 289 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 DNTTIP1Q9H147 329 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 RANBP3Q9H6Z4 567 aaPredicted RBP13.05□□□□□ -0.32
MUC1-220ENST00000498431 NECAP2Q9NVZ3 263 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 CDH10Q9Y6N8 788 aa13.05□□□□□ -0.32
MUC1-220ENST00000498431 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
MUC1-220ENST00000498431 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
MUC1-220ENST00000498431 CD28P10747 220 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 ACKR3P25106 362 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 POU1F1P28069 291 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 RRM2P31350 389 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 FMO3P31513 532 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 GNALP38405 381 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 BMXP51813 675 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 CAV3P56539 151 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 ZNF121P58317 390 aaPredicted RBP13.04□□□□□ -0.32
MUC1-220ENST00000498431 GRB2P62993 217 aaKnown RBP13.04□□□□□ -0.32
MUC1-220ENST00000498431 CRMP1Q14194 572 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 OR52L1Q8NGH7 329 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 OR10Z1Q8NGY1 313 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 PIFOQ8TCI5 191 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 PHF21AQ96BD5 680 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 MED30Q96HR3 178 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 AMELYQ99218 206 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 NMNAT2Q9BZQ4 307 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 FAM234AQ9H0X4 552 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 MEGF9Q9H1U4 602 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 BRD7Q9NPI1 651 aa13.04□□□□□ -0.32
MUC1-220ENST00000498431 SF3B6Q9Y3B4 125 aaKnown RBP13.04□□□□□ -0.32
MUC1-220ENST00000498431 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 ZNF850A8MQ14 1090 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 ADARB2-AS1A8MUL3 147 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 XPNPEP2O43895 674 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 SPI1P17947 270 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 PRDX4Q13162 271 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 EIF2B1Q14232 305 aaKnown RBP13.03□□□□□ -0.32
MUC1-220ENST00000498431 TEX30Q5JUR7 227 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 ZBTB37Q5TC79 503 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 MKXQ8IYA7 352 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 ZNRF1Q8ND25 227 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 OR9Q2Q8NGE9 314 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 OR6K6Q8NGW6 343 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 HPSE2Q8WWQ2 592 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 NKX3-1Q99801 234 aaPredicted RBP13.03□□□□□ -0.32
MUC1-220ENST00000498431 MICU1Q9BPX6 476 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 RTL8AQ9BWD3 113 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 MAGIXQ9H6Y5 334 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 ZNF702PQ9H963 129 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
MUC1-220ENST00000498431 TENM3Q9P273 2699 aa13.02□□□□□ -0.32
MUC1-220ENST00000498431 TCRBV3S1A0A5B6 114 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 ANXA2P2A6NMY6 339 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 OR2AT4A6NND4 320 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 H0YAE9 185 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 FBXO24O75426 580 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 RHBDL1O75783 438 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 HOXB6P17509 224 aaKnown RBP13.02□□□□□ -0.33
MUC1-220ENST00000498431 HSD11B1P28845 292 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 DCTDP32321 178 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 IFNGR2P38484 337 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 SLC15A1P46059 708 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 GABRA2P47869 451 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 IL5RAQ01344 420 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 BLMHQ13867 455 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 FAM98BQ52LJ0 330 aaKnown RBP13.02□□□□□ -0.33
MUC1-220ENST00000498431 LINC01590Q5TEZ4 76 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 FAM185AQ8N0U4 392 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 OR5D13Q8NGL4 314 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 RNF133Q8WVZ7 376 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 OR5P3Q8WZ94 311 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 R3HDM4Q96D70 268 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 ABHD6Q9BV23 337 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 NPFFR1Q9GZQ6 430 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 IL20Q9NYY1 176 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 NLKQ9UBE8 527 aa13.02□□□□□ -0.33
MUC1-220ENST00000498431 TMEM210A6NLX4 147 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 FABP3P05413 133 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 PSG2P11465 335 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 ERVFRD-1P60508 538 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 AANATQ16613 207 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 FAM76BQ5HYJ3 339 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 FOXB2Q5VYV0 432 aa13.01□□□□□ -0.33
MUC1-220ENST00000498431 KCTD8Q6ZWB6 473 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms