RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SLC5A10A0PJK1 596 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 SAP18O00422 153 aaKnown RBP4.74□□□□□ -1.65
BRCA1-224ENST00000497488 PHF1O43189 567 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-224ENST00000497488 MELTFP08582 738 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 ATF6P18850 670 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 IL2RGP31785 369 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 TIMP3P35625 211 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 CAPZBP47756 277 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 TUFMP49411 452 aaKnown RBP4.74□□□□□ -1.65
BRCA1-224ENST00000497488 ERVS71-1P61550 626 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 PPP1CBP62140 327 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 SELENOTP62341 195 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 CYP24A1Q07973 514 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 SMARCB1Q12824 385 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 MLLT11Q13015 90 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-224ENST00000497488 DEFB115Q30KQ5 88 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 RFX4Q33E94 735 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 ZNF506Q5JVG8 444 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 FAM45BPQ6NSW5 357 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 UNQ9370/PRO34162Q6UXP9 181 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 P2RY8Q86VZ1 359 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 RAB43Q86YS6 212 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 OR10Z1Q8NGY1 313 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 CCDC26Q8TAB7 109 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 ERMNQ8TAM6 284 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 C18orf12Q96KH6 178 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 TAAR1Q96RJ0 339 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 VAT1Q99536 393 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 BARHL1Q9BZE3 327 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 OR51B5Q9H339 312 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 OR51B6Q9H340 312 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 ZNF442Q9H7R0 627 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 MIEF1Q9NQG6 463 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 FGFR1OP2Q9NVK5 253 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 KCNE3Q9Y6H6 103 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 TRPM7Q96QT4 1865 aa4.74□□□□□ -1.65
BRCA1-224ENST00000497488 PAPPA2Q9BXP8 1791 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 OR2AT4A6NND4 320 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 E9PAM4 449 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 F5H768 121 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 AGPAT2O15120 278 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 MAGEB4O15481 346 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-224ENST00000497488 TGOLN2O43493 480 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 ATP6V1G2O95670 118 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 HPNP05981 417 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 OR8U8P0C7N1 319 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 PATE4P0C8F1 98 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 THRAP10827 490 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CD37P11049 281 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 PVALBP20472 110 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-224ENST00000497488 PFN2P35080 140 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 PPICP45877 212 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 VDAC2P45880 294 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-224ENST00000497488 SERPINB9P50453 376 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CAV2P51636 162 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CLDN12P56749 244 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 OR12D2P58182 307 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 RAB8AP61006 207 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CXCR4P61073 352 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 TRIP13Q15645 432 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-224ENST00000497488 SGCAQ16586 387 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 LRRC36Q1X8D7 754 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CCNJQ5T5M9 372 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 OR2T5Q6IEZ7 315 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 ZNF620Q6ZNG0 422 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CBR4Q8N4T8 237 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 SPICQ8N5J4 248 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 OR2T29Q8NH02 315 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 LMO3Q8TAP4 145 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 ACTL9Q8TC94 416 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 CREB3L1Q96BA8 519 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 PACRGQ96M98 296 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-224ENST00000497488 PSMB7Q99436 277 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 GPR22Q99680 433 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 SYT15Q9BQS2 421 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 UGT1A7Q9HAW7 530 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 UGT1A8Q9HAW9 530 aa4.73□□□□□ -1.65
BRCA1-224ENST00000497488 ECM29Q5VYK3 1845 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 MYH13Q9UKX3 1938 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 TRAV39A0A0B4J263 110 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 ISPDA4D126 451 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 OR5K4A6NMS3 321 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 GJE1A6NN92 205 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 H7C1H1 209 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 HAT1O14929 419 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 SYNGR1O43759 233 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 CTNSO60931 367 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 CRLF1O75462 422 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 ZFAND5O76080 213 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 TTC4O95801 387 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 APOEP02649 317 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 PLA2G2AP14555 144 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 RPA3P35244 121 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-224ENST00000497488 CDKN2AP42771 156 aaKnown RBP4.72□□□□□ -1.65
BRCA1-224ENST00000497488 DLX1P56177 255 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 ARF6P62330 175 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 GNB1P62873 340 aa4.72□□□□□ -1.65
BRCA1-224ENST00000497488 C2orf54Q08AI8 447 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms