RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CCRL2O00421 344 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 AKR7A2O43488 359 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 SERPINB7O75635 380 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 IL6P05231 212 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 PSG2P11465 335 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 RBM34P42696 430 aaKnown RBP5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 OR12D2P58182 307 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 TRAP1Q12931 704 aaKnown RBP5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 SCARB2Q14108 478 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 MEP1BQ16820 701 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 C9orf152Q5JTZ5 239 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 C6orf10Q5SRN2 563 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 GLYATL3Q5SZD4 288 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 MINOS1Q5TGZ0 78 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 ASPHD1Q5U4P2 390 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 MSANTD1Q6ZTZ1 278 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 TRMT10CQ7L0Y3 403 aaKnown RBP5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 FAM122BQ7Z309 247 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 MAVSQ7Z434 540 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 TSEN54Q7Z6J9 526 aaKnown RBP5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 ZNF429Q86V71 674 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 GLB1L2Q8IW92 636 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 COMMD1Q8N668 190 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 CHPT1Q8WUD6 406 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 IFT81Q8WYA0 676 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 CDRT15Q96T59 188 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 TXLNGYQ9BZA5 131 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 C20orf27Q9GZN8 174 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 IKZF5Q9H5V7 419 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 TMEM38AQ9H6F2 299 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 PPP1R3EQ9H7J1 279 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 ISYNA1Q9NPH2 558 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 TBC1D23Q9NUY8 699 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 NLKQ9UBE8 527 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 ADAM18Q9Y3Q7 739 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 SIRT4Q9Y6E7 314 aaPredicted RBP5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 MINOS1-NBL1R4GNA1 71 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 hCG_1809904A0A1W2PP81 198 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 A0A1W2PPE2 198 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 A0A1W2PPH5 198 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 A0A1W2PR64 198 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 A0A1W2PRV1 198 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 H3BUI4 141 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 SDHDO14521 159 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 AHCYL1O43865 530 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 TYROBPO43914 113 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 TIPRLO75663 272 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 OR5F1O95221 314 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 CD247P20963 164 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 OTX1P32242 354 aaPredicted RBP5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 MDH1P40925 334 aaKnown RBP5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 GABRA2P47869 451 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 CDX1P47902 265 aaPredicted RBP5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 MPP2Q14168 576 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 SRSF7Q16629 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 LCN8Q6JVE9 175 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 SLC18B1Q6NT16 456 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 DHDDSQ86SQ9 333 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 LYPD6Q86Y78 171 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 CALHM1Q8IU99 346 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 LNX2Q8N448 690 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 RNF152Q8N8N0 203 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 OR13D1Q8NGV5 346 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 OR8S1Q8NH09 359 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 TMEM239Q8WW34 195 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 CAPSLQ8WWF8 208 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 APOPT1Q96IL0 206 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 Q96M85 177 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 SORT1Q99523 831 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 ZBTB18Q99592 522 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 ATF6BQ99941 703 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 ST6GALNAC5Q9BVH7 336 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 SYT4Q9H2B2 425 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 RETNQ9HD89 108 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 LINC00527Q9UJ94 153 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 HHLA2Q9UM44 414 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 POLR1DQ9Y2S0 133 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 GMEB1Q9Y692 573 aa5.51□□□□□ -1.53
PDLIM1-203ENST00000490391 TRAV27A0A087WT01 109 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 TRBV5-3A0A0A0MS03 114 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 M0QZK8 103 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 M0R135 149 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 DCTN6O00399 190 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 SLC16A7O60669 478 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 KHDRBS3O75525 346 aaKnown RBP5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 RBP4P02753 201 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 SHBGP04278 402 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 BPGMP07738 259 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 DCTDP32321 178 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 CRYBA2P53672 197 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 RFX4Q33E94 735 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 LRIF1Q5T3J3 769 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 TMPRSS11FQ6ZWK6 438 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 DRAM1Q8N682 238 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 CYB561A3Q8NBI2 242 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 FAM156AQ8NDB6 213 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 OR4M1Q8NGD0 313 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 OR4P4Q8NGL7 312 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 OR9I1Q8NGQ6 314 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 RPL3LQ92901 407 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms