RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SOX2P48431 317 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 MALLQ13021 153 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 DGUOKQ16854 277 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 PCGF3Q3KNV8 242 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 FAM209AQ5JX71 171 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 OR5L1Q8NGL2 311 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 SGK3Q96BR1 496 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 REEP6Q96HR9 211 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 LYZL4Q96KX0 146 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 DCUN1D5Q9BTE7 237 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 TCF7L1Q9HCS4 588 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 TUBG2Q9NRH3 451 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 ZNF275Q9NSD4 429 aaPredicted RBP14.5□□□□□ -0.09
VIM-205ENST00000485947 NKIRAS2Q9NYR9 191 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 FOXJ3Q9UPW0 622 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 V9GYS6 101 aa14.5□□□□□ -0.09
VIM-205ENST00000485947 SONP18583 2426 aaKnown RBP14.49□□□□□ -0.09
VIM-205ENST00000485947 PDCD5O14737 125 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 IGHV4-31P0DP07 118 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 CCL2P13500 99 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 ZNF182P17025 639 aaPredicted RBP14.49□□□□□ -0.09
VIM-205ENST00000485947 SRMP19623 302 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 ANOS1P23352 680 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 SDC2P34741 201 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 KLF3P57682 345 aaPredicted RBP14.49□□□□□ -0.09
VIM-205ENST00000485947 RIN1Q13671 783 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 GFOD2Q3B7J2 385 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 CHRFAM7AQ494W8 412 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 GLYATL3Q5SZD4 288 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 FAM27D1Q5T7N8 215 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 PARP16Q8N5Y8 322 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 OR14K1Q8NGZ2 314 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 SYNPRQ8TBG9 265 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 FAM71F1Q96KD3 344 aaPredicted RBP14.49□□□□□ -0.09
VIM-205ENST00000485947 PPIL3Q9H2H8 161 aaKnown RBP14.49□□□□□ -0.09
VIM-205ENST00000485947 SNTG1Q9NSN8 517 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 CKLFQ9UBR5 152 aa14.49□□□□□ -0.09
VIM-205ENST00000485947 hCG_38984A0A1B0GV85 526 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 C5orf63A6NC05 138 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 ZNF20P17024 532 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 RPS19P39019 145 aaKnown RBP14.48□□□□□ -0.09
VIM-205ENST00000485947 WNT5AP41221 380 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 MAGEB1P43366 347 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 MAP2K3P46734 347 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 TMEM33P57088 247 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 CARTPTQ16568 116 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 MSMPQ1L6U9 139 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 CROCCP3Q8IVE0 287 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 SERPINA12Q8IW75 414 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 PAQR4Q8N4S7 273 aaPredicted RBP14.48□□□□□ -0.09
VIM-205ENST00000485947 RDH5Q92781 318 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 SLC25A46Q96AG3 418 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 SYT3Q9BQG1 590 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 BPESC1Q9GZL8 116 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 CHODLQ9H9P2 273 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 PLEKHA1Q9HB21 404 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 CGGBP1Q9UFW8 167 aaPredicted RBP14.48□□□□□ -0.09
VIM-205ENST00000485947 DUSP13Q9UII6 198 aa14.48□□□□□ -0.09
VIM-205ENST00000485947 A0A1W2PPK0 400 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 SHISA3A0PJX4 238 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 H3BSH0 61 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 TMEM127O75204 238 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 IGHV3-13P01766 116 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 IGFBP3P17936 291 aaPredicted RBP14.47□□□□□ -0.09
VIM-205ENST00000485947 RAB3BP20337 219 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 THBS2P35442 1172 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 RORCP51449 518 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 ZBTB37Q5TC79 503 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 FAM166AQ6J272 317 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 PGAP1Q75T13 922 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 SEMA6DQ8NFY4 1073 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 OR2AE1Q8NHA4 323 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 PP6455Q8WZ26 134 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 FGGYQ96C11 551 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 STARD10Q9Y365 291 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 A3GALT2U3KPV4 340 aa14.47□□□□□ -0.09
VIM-205ENST00000485947 CHD3Q12873 2000 aaKnown RBP14.46□□□□□ -0.09
VIM-205ENST00000485947 IGHV4-61A0A0C4DH41 118 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 MEGF11A6BM72 1044 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 LMX1BO60663 402 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 FAM157BP0CG42 384 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 FAM157CP0CG43 387 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 DDOSTP39656 456 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 PSMD7P51665 324 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 PPP3R1P63098 170 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 FAM3AP98173 230 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 ZNF92Q03936 586 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 MXD1Q05195 221 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 OR8B8Q15620 311 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 NKPD1Q17RQ9 610 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 ZNF718Q3SXZ3 478 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 RFPL4BQ6ZWI9 263 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 MRPL21Q7Z2W9 205 aaKnown RBP14.46□□□□□ -0.09
VIM-205ENST00000485947 ZNF101Q8IZC7 436 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.09
VIM-205ENST00000485947 OR5D14Q8NGL3 314 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 ADAT3Q96EY9 351 aaPredicted RBP14.46□□□□□ -0.09
VIM-205ENST00000485947 SOX7Q9BT81 388 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 CYSLTR2Q9NS75 346 aa14.46□□□□□ -0.09
VIM-205ENST00000485947 TAAR3PQ9P1P4 343 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms