RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 COMMD4Q9H0A8 199 aa10□□□□□ -0.81
APTX-227ENST00000485479 GSX1Q9H4S2 264 aaPredicted RBP10□□□□□ -0.81
APTX-227ENST00000485479 LPAR2Q9HBW0 351 aa10□□□□□ -0.81
APTX-227ENST00000485479 HHLA2Q9UM44 414 aa10□□□□□ -0.81
APTX-227ENST00000485479 IGHV3OR15-7A0A075B7D8 119 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 IGKV1-9A0A0C4DH69 117 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 TMEM212A6NML5 194 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 CLDN25C9JDP6 229 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 ISG15P05161 165 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 CD99P14209 185 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 ZNF20P17024 532 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 CD80P33681 288 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 TGM4P49221 684 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 ZMYND11Q15326 602 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 CLVS2Q5SYC1 327 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 DMKNQ6E0U4 476 aaPredicted RBP9.99□□□□□ -0.81
APTX-227ENST00000485479 ASPHD2Q6ICH7 369 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 ANGPTL5Q86XS5 388 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 ZNF488Q96MN9 340 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 MPC1Q9Y5U8 109 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 ARHGAP32A7KAX9 2087 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 YLPM1P49750 1951 aaKnown RBP9.99□□□□□ -0.81
APTX-227ENST00000485479 IGKV1-27A0A075B6S5 117 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.99□□□□□ -0.81
APTX-227ENST00000485479 TMEM178BH3BS89 294 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 AKR7A2O43488 359 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 RPS11P62280 158 aaKnown RBP eCLIP9.99□□□□□ -0.81
APTX-227ENST00000485479 SPHARQ15513 63 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 LIPKQ5VXJ0 399 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 TMEM42Q69YG0 159 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 HAGHLQ6PII5 290 aaPredicted RBP9.99□□□□□ -0.81
APTX-227ENST00000485479 PRSS48Q7RTY5 328 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 CALHM1Q8IU99 346 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 SCCPDHQ8NBX0 429 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 OR51A2Q8NGJ7 313 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 OR5D18Q8NGL1 313 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 RPS4Y2Q8TD47 263 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 TMEM203Q969S6 136 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 OR14A2Q96R54 314 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 TMED9Q9BVK6 235 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 RTL8AQ9BWD3 113 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 CHST5Q9GZS9 411 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 SLC22A4Q9H015 551 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 WDR13Q9H1Z4 485 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 DLL4Q9NR61 685 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 DHDHQ9UQ10 334 aa9.99□□□□□ -0.81
APTX-227ENST00000485479 MAGEA13PA6NCF6 341 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 OGG1O15527 345 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 SYNGR1O43759 233 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 RPSAP08865 295 aaKnown RBP9.98□□□□□ -0.81
APTX-227ENST00000485479 CSF3P09919 207 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 OCM2P0CE71 109 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 USF1P22415 310 aaPredicted RBP9.98□□□□□ -0.81
APTX-227ENST00000485479 GIFP27352 417 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 GATA4P43694 442 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 HAAOP46952 286 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 CEACAM21Q3KPI0 293 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 CCDC58Q4VC31 144 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 FAM27D1Q5T7N8 215 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 WDR82Q6UXN9 313 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 Q6ZSR3 168 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 GCSAMQ8N6F7 178 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 CLDND2Q8NHS1 167 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 LRRC29Q8WV35 223 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 TMEM106AQ96A25 262 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 COX4I2Q96KJ9 171 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 HIST1H2AAQ96QV6 131 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
APTX-227ENST00000485479 MICU1Q9BPX6 476 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 MYOZ1Q9NP98 299 aaPredicted RBP9.98□□□□□ -0.81
APTX-227ENST00000485479 SNTG1Q9NSN8 517 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 C14orf119Q9NWQ9 140 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 TAS2R4Q9NYW5 299 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 BLOC1S6Q9UL45 172 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 ABCA1O95477 2261 aa9.98□□□□□ -0.81
APTX-227ENST00000485479 INHBBP09529 407 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 CALCBP10092 127 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 ATP6V1B1P15313 513 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DSCR9P59020 149 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 SEC61A1P61619 476 aaKnown RBP9.97□□□□□ -0.81
APTX-227ENST00000485479 BTG1P62324 171 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 EMX1Q04741 257 aaPredicted RBP9.97□□□□□ -0.81
APTX-227ENST00000485479 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 C18orf12Q96KH6 178 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 GAL3ST1Q99999 423 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 ACOT13Q9NPJ3 140 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 ZNF281Q9Y2X9 895 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 NPTNQ9Y639 398 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 A0A1B0GW55 424 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 NDUFS8O00217 210 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DUX4L2P0CJ85 424 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DUX4L3P0CJ86 424 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DUX4L4P0CJ87 422 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DUX4L5P0CJ88 424 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DUX4L6P0CJ89 424 aa9.97□□□□□ -0.81
APTX-227ENST00000485479 DUX4L7P0CJ90 424 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms