RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PIGCQ92535 297 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 AMELYQ99218 206 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 CITED1Q99966 193 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 MMP27Q9H306 513 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 NLKQ9UBE8 527 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 VPREB3Q9UKI3 123 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 LRP12Q9Y561 859 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 NPFFO15130 113 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 SIGLEC5O15389 551 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 GSC2O15499 205 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 NDUFB7P17568 137 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 GLRA1P23415 457 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 DCTDP32321 178 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 TGFBR2P37173 567 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 GMFBP60983 142 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 ACTR3P61158 418 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 FLOT2Q14254 428 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 ZBTB37Q5TC79 503 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 PDZD9Q8IXQ8 264 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 OR8B12Q8NGG6 310 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 CANT1Q8WVQ1 401 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 RPL3LQ92901 407 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 THTPAQ9BU02 230 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 MOB1AQ9H8S9 216 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 SLC25A19Q9HC21 320 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 SIRT7Q9NRC8 400 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNRD1Q9P1U0 126 aa11.89□□□□□ -0.51
SMARCE1-209ENST00000478349 TMEM269A0A1B0GVZ9 245 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 hCG_1809904A0A1W2PP81 198 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 A0A1W2PR64 198 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 A0A1W2PRV1 198 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 OR2AT4A6NND4 320 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 AKR7A2O43488 359 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 ALOX5APP20292 161 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 ACKR3P25106 362 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 GPM6AP51674 278 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 UBE2E1P51965 193 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 CDK5Q00535 292 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 RELBQ01201 579 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 RIPPLY1Q0D2K3 151 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 SNAPC1Q16533 368 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 SMIM21Q3B7S5 101 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 CEACAM21Q3KPI0 293 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 SPATA24Q86W54 205 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 OR5T2Q8NGG2 359 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 ANGPTL6Q8NI99 470 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 MNTQ99583 582 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 SNTG1Q9NSN8 517 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 RASL12Q9NYN1 266 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 TAS2R1Q9NYW7 299 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 DNAJB9Q9UBS3 223 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 ENPP5Q9UJA9 477 aa11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 SF3B6Q9Y3B4 125 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-209ENST00000478349 ANKRD61A6NGH8 418 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 H0YAE9 185 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 SLC1A7O00341 560 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 GYG2O15488 501 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 CLPXO76031 633 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 ACAA1P09110 424 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 GABRA2P47869 451 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 RIDAP52758 137 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 CAPZA1P52907 286 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 CBX1P83916 185 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 DEFA6Q01524 100 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 APOFQ13790 326 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 MIDNQ504T8 468 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF684Q5T5D7 378 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 PLCXD3Q63HM9 321 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 TMEM185AQ8NFB2 350 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 OR5A2Q8NGI9 324 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 LINC01006Q8NI28 216 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 HPSE2Q8WWQ2 592 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 NRBF2Q96F24 287 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 GAFA1Q96PS6 74 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 CNN2Q99439 309 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 WDR13Q9H1Z4 485 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 TCF7L1Q9HCS4 588 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 RAB18Q9NP72 206 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 ENOPH1Q9UHY7 261 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 IKZF2Q9UKS7 526 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 POLDIP2Q9Y2S7 368 aa11.87□□□□□ -0.51
SMARCE1-209ENST00000478349 A0A1B0GW55 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 MEIOCA2RUB1 952 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 ZNF732B4DXR9 585 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
SMARCE1-209ENST00000478349 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms