RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
VHL-203ENST00000477538 SLITRK2Q9H156 845 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 CXXC4Q9H2H0 198 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 NEK6Q9HC98 313 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 C14orf119Q9NWQ9 140 aa13.75□□□□□ -0.21
VHL-203ENST00000477538 FAM230AA0A1W2PPH8 454 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 OR5B21A6NL26 309 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 ZNF732B4DXR9 585 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 H7C417 338 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 GABARAPO95166 117 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 MAS1P04201 325 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 CD55P08174 381 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 HCKP08631 526 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 PRKACBP22694 351 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 MYL9P24844 172 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 BDKRB2P30411 391 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 THBS2P35442 1172 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 CDKN1AP38936 164 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 CD200P41217 278 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 SRP9P49458 86 aaKnown RBP13.74□□□□□ -0.21
VHL-203ENST00000477538 GPM6AP51674 278 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 FUT6P51993 359 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 LSM3P62310 102 aaKnown RBP13.74□□□□□ -0.21
VHL-203ENST00000477538 CCL8P80075 99 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 PCGF3Q3KNV8 242 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 FAM209AQ5JX71 171 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 SPSB1Q96BD6 273 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 BORCS8Q96FH0 119 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 KCTD7Q96MP8 289 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 OR2V2Q96R30 315 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 RNF167Q9H6Y7 350 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 TMEM138Q9NPI0 162 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 IL19Q9UHD0 177 aa13.74□□□□□ -0.21
VHL-203ENST00000477538 PQLC2LA1A4F0 135 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 OVOL3O00110 214 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 MAGEB3O15480 346 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 TPD52L2O43399 206 aaKnown RBP13.73□□□□□ -0.21
VHL-203ENST00000477538 ERCC1P07992 297 aaPredicted RBP13.73□□□□□ -0.21
VHL-203ENST00000477538 GNG3P63215 75 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 MAB21L1Q13394 359 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 LHFPL2Q6ZUX7 228 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 DNAAF1Q8NEP3 725 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 ITLN1Q8WWA0 313 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 MEGF10Q96KG7 1140 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 SORCS2Q96PQ0 1159 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 EGLN1Q9GZT9 426 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 RAB1BQ9H0U4 201 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 CXorf56Q9H5V9 222 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 SNTG1Q9NSN8 517 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 DECR2Q9NUI1 292 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 FBN2P35556 2912 aa13.73□□□□□ -0.21
VHL-203ENST00000477538 APCP25054 2843 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 TRAV1-2A0A0B4J238 106 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 IGHV3-64DA0A0J9YX35 117 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 LOC100289279A0A1B0GTE1 492 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 SHISA3A0PJX4 238 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 MEGF11A6BM72 1044 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 TMEM210A6NLX4 147 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 NCR1O76036 304 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 GRPP07492 148 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 ADRA2CP18825 462 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 TGFBR1P36897 503 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 RBP2P50120 134 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 ATP1B3P54709 279 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 TESK1Q15569 626 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 SPRNQ5BIV9 151 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 DDI2Q5TDH0 399 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 PRAMEF6Q5VXH4 476 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 WDR86Q86TI4 376 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 LRRTM1Q86UE6 522 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 NKAIN3Q8N8D7 197 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 OR52N4Q8NGI2 321 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 SPACA5Q96QH8 159 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 SAP30LQ9HAJ7 183 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 UNC79Q9P2D8 2635 aa13.72□□□□□ -0.21
VHL-203ENST00000477538 IGKV1-27A0A075B6S5 117 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 LRP5LA4QPB2 252 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.21
VHL-203ENST00000477538 ALDOBP05062 364 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 TNFRSF1AP19438 455 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 MTNR1BP49286 362 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 TMBIM6P55061 237 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 MTCP1P56278 107 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 VBP1P61758 197 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 NCS1P62166 190 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 ZNF154Q13106 437 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 CTF1Q16619 201 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 FAM76BQ5HYJ3 339 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 RAB2BQ8WUD1 216 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 RFT1Q96AA3 541 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 CPNE2Q96FN4 548 aaPredicted RBP13.71□□□□□ -0.21
VHL-203ENST00000477538 EDARQ9UNE0 448 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 CEPT1Q9Y6K0 416 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 TACC2O95359 2948 aa13.71□□□□□ -0.21
VHL-203ENST00000477538 POLQO75417 2590 aa13.71□□□□□ -0.22
VHL-203ENST00000477538 DOCK11Q5JSL3 2073 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 CCDC160A6NGH7 325 aa13.7□□□□□ -0.22
VHL-203ENST00000477538 A6NLC8 198 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms