RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 YKT6O15498 198 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 CD74P04233 296 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 GLI4P10075 376 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 CD34P28906 385 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 BLVRBP30043 206 aaPredicted RBP12.93□□□□□ -0.34
SF1-211ENST00000448404 CYB561P49447 251 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 ATP1B3P54709 279 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 SNU13P55769 128 aaKnown RBP12.93□□□□□ -0.34
SF1-211ENST00000448404 TRA2AQ13595 282 aaKnown RBP eCLIP12.93□□□□□ -0.348e-8■□□□□ 9.4
SF1-211ENST00000448404 ATRAIDQ6UW56 229 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 DOK3Q7L591 496 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 AAED1Q7RTV5 226 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 GALNTL5Q7Z4T8 443 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 FOXRED1Q96CU9 486 aaPredicted RBP12.93□□□□□ -0.34
SF1-211ENST00000448404 TMPRSS13Q9BYE2 586 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 SLC6A15Q9H2J7 730 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 IGKV1-27A0A075B6S5 117 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 ZNF716A6NP11 495 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 TMEM127O75204 238 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 MGMTP16455 207 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 PTGFRP43088 359 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 CBX5P45973 191 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 AKR1D1P51857 326 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 RRADP55042 308 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
SF1-211ENST00000448404 TFAP2EQ6VUC0 442 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 C3P1Q6ZMU1 363 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 ZNF701Q9NV72 531 aaPredicted RBP12.93□□□□□ -0.34
SF1-211ENST00000448404 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
SF1-211ENST00000448404 ZNF587BE7ETH6 402 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 SGCEO43556 437 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 ADAP1O75689 374 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 IFNA6P05013 189 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 HIST1H1DP16402 221 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 ITGA3P26006 1051 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 IL13RA1P78552 427 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 TAF9Q16594 264 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 UQCC2Q9BRT2 126 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 OR51B6Q9H340 312 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 SCPEP1Q9HB40 452 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 PCDHB16Q9NRJ7 776 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 PTTG3PQ9NZH4 202 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 CRIM1Q9NZV1 1036 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 EMC3Q9P0I2 261 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 ATMQ13315 3056 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 OTOGLQ3ZCN5 2332 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 A0A087WZY1 265 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 MSTNO14793 375 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 EIF1BO60739 113 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 RLN2P04090 185 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 SP9P0CG40 484 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 RAB6AP20340 208 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 ACP1P24666 158 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 RPL35P42766 123 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 MAGEA5P43359 124 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 HTR5AP47898 357 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 NHLRC3Q5JS37 347 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 ARMC10Q8N2F6 343 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 MFFQ9GZY8 342 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 ZNF629Q9UEG4 869 aaPredicted RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 ZNF175Q9Y473 711 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 CDX4O14627 284 aaPredicted RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 HPNP05981 417 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 TMEM225BP0DP42 221 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 OPRM1P35372 400 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 RAC3P60763 192 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 PSG4Q00888 419 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 FOXO1Q12778 655 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 KCNMB1Q16558 191 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 C10orf128Q5T292 105 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 SKA3Q8IX90 412 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 ZNF75AQ96N20 296 aa12.92□□□□□ -0.34
SF1-211ENST00000448404 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 MCTS1Q9ULC4 181 aaKnown RBP12.92□□□□□ -0.34
SF1-211ENST00000448404 DISC1C4P0D8 188 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 DHRS3O75911 302 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 S100A11P31949 105 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 ARHGDIBP52566 201 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 TSPO2Q5TGU0 170 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 PPP1R1CQ8WVI7 109 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 LDAHQ9H6V9 325 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 CALHM2Q9HA72 323 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 KIF25Q9UIL4 384 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 LOC102725191A0A1B0GVB3 256 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 ZNF503-AS2A6NEH8 195 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 OR5H14A6NHG9 310 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 SULT1C2O00338 296 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 NEURL1O76050 574 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 APOC3P02656 99 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 GLRA1P23415 457 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 ZBTB25P24278 435 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 SRD5A2P31213 254 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 MTCP1P56278 107 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 LSM6P62312 80 aaKnown RBP12.91□□□□□ -0.34
SF1-211ENST00000448404 RAB12Q6IQ22 244 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 FNDC9Q8TBE3 224 aa12.91□□□□□ -0.34
SF1-211ENST00000448404 REEP6Q96HR9 211 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms