RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PSMA1P25786 263 aaKnown RBP14.61□□□□□ -0.07
LIME1-202ENST00000444951 TGFBR2P37173 567 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 PPOXP50336 477 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 TNFAIP6P98066 277 aaPredicted RBP14.61□□□□□ -0.07
LIME1-202ENST00000444951 ZBTB37Q5TC79 503 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 TMEM91Q6ZNR0 172 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 SERPINA12Q8IW75 414 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 DERL3Q96Q80 235 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 SLC22A4Q9H015 551 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 OR51E2Q9H255 320 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 ZDHHC8Q9ULC8 765 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 MPC1Q9Y5U8 109 aa14.61□□□□□ -0.07
LIME1-202ENST00000444951 CUBNO60494 3623 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 LOC100506127A0A0U1RQW1 187 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 FAM230AA0A1W2PPH8 454 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 GRPP07492 148 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 MAPK3P27361 379 aaPredicted RBP14.6□□□□□ -0.07
LIME1-202ENST00000444951 KRTAP1-1Q07627 177 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 UBE2V2Q15819 145 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 SPRNQ5BIV9 151 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 GPR141Q7Z602 305 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 OR5D14Q8NGL3 314 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 UBASH3BQ8TF42 649 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 PP6455Q8WZ26 134 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 RNF170Q96K19 258 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 SORCS2Q96PQ0 1159 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 OR2V2Q96R30 315 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 MICU1Q9BPX6 476 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 CHCHD6Q9BRQ6 235 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 CHST5Q9GZS9 411 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 RAB1BQ9H0U4 201 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 ZCCHC4Q9H5U6 513 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 CXorf56Q9H5V9 222 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 DECR2Q9NUI1 292 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 NKIRAS2Q9NYR9 191 aa14.6□□□□□ -0.07
LIME1-202ENST00000444951 NOP16Q9Y3C1 178 aaKnown RBP14.6□□□□□ -0.07
LIME1-202ENST00000444951 TRBV5-7A0A0A0MS05 114 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 PIN1P1O15428 100 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 NDUFS7O75251 213 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 GATBO75879 557 aaKnown RBP14.59□□□□□ -0.07
LIME1-202ENST00000444951 LY6HO94772 140 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 ERCC1P07992 297 aaPredicted RBP14.59□□□□□ -0.07
LIME1-202ENST00000444951 ATF1P18846 271 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 CRYBB2P43320 205 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 ALDH3B2P48448 385 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 GPM6AP51674 278 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 HNRNPA0Q13151 305 aaKnown RBP14.59□□□□□ -0.07
LIME1-202ENST00000444951 PRAMEF6Q5VXH4 476 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 TMEM42Q69YG0 159 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 C22orf42Q6IC83 251 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 UNQ9370/PRO34162Q6UXP9 181 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 PARP16Q8N5Y8 322 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 OR1M1Q8NGA1 313 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 OR13F1Q8NGS4 319 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 ITLN1Q8WWA0 313 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 HPSE2Q8WWQ2 592 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 OR5P3Q8WZ94 311 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 ITFG2Q969R8 447 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 C10orf35Q96D05 121 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 ITPKCQ96DU7 683 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 YIPF6Q96EC8 236 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 TRMT61AQ96FX7 289 aaKnown RBP14.59□□□□□ -0.07
LIME1-202ENST00000444951 DIRC2Q96SL1 478 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 MDFIQ99750 246 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 RTL8AQ9BWD3 113 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 PPIL3Q9H2H8 161 aaKnown RBP14.59□□□□□ -0.07
LIME1-202ENST00000444951 TREM2Q9NZC2 230 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 CKLFQ9UBR5 152 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
LIME1-202ENST00000444951 STUB1Q9UNE7 303 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 SSR3Q9UNL2 185 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 SLC7A11Q9UPY5 501 aa14.59□□□□□ -0.07
LIME1-202ENST00000444951 CR1P17927 2039 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 TRAV8-7A0A075B6U6 113 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 ZNF732B4DXR9 585 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 GPX5O75715 221 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 NCR1O76036 304 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 MAS1P04201 325 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 HCKP08631 526 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 RAB3AP20336 220 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 THBS2P35442 1172 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 RBMXP38159 391 aaKnown RBP14.58□□□□□ -0.08
LIME1-202ENST00000444951 RPL5P46777 297 aaKnown RBP14.58□□□□□ -0.08
LIME1-202ENST00000444951 SRP9P49458 86 aaKnown RBP14.58□□□□□ -0.08
LIME1-202ENST00000444951 ATP5J2P56134 94 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 LSM3P62310 102 aaKnown RBP14.58□□□□□ -0.08
LIME1-202ENST00000444951 PPP3R1P63098 170 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 CNN3Q15417 329 aaKnown RBP14.58□□□□□ -0.08
LIME1-202ENST00000444951 PCGF3Q3KNV8 242 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 CEACAM21Q3KPI0 293 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 HSD17B12Q53GQ0 312 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 ASPHD2Q6ICH7 369 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 MAPK1IP1LQ8NDC0 245 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 OR51A2Q8NGJ7 313 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 THRSPQ92748 146 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 RPL3LQ92901 407 aaKnown RBP14.58□□□□□ -0.08
LIME1-202ENST00000444951 MEGF10Q96KG7 1140 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 SPACA5Q96QH8 159 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 FUNDC2Q9BWH2 189 aa14.58□□□□□ -0.08
LIME1-202ENST00000444951 EGLN1Q9GZT9 426 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms