RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 ITLN1Q8WWA0 313 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 HPSE2Q8WWQ2 592 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 SPSB1Q96BD6 273 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 ORAI1Q96D31 301 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 MEGF10Q96KG7 1140 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 OR2V2Q96R30 315 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 SLITRK2Q9H156 845 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 OR51E2Q9H255 320 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 TCF7L1Q9HCS4 588 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 ZNF701Q9NV72 531 aaPredicted RBP13.39□□□□□ -0.27
USP40-206ENST00000443711 GSTK1Q9Y2Q3 226 aa13.39□□□□□ -0.27
USP40-206ENST00000443711 TACC2O95359 2948 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 IGKV1-9A0A0C4DH69 117 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 TMEM210A6NLX4 147 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 MAGEB3O15480 346 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 F12P00748 615 aaPredicted RBP13.38□□□□□ -0.27
USP40-206ENST00000443711 PAX1P15863 534 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 SRMP19623 302 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 AZGP1P25311 298 aaKnown RBP13.38□□□□□ -0.27
USP40-206ENST00000443711 GPM6AP51674 278 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 EFNA4P52798 201 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 ATP1B3P54709 279 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 MAB21L1Q13394 359 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 DMRTC1Q5HYR2 192 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 FAM27D1Q5T7N8 215 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 ASPHD2Q6ICH7 369 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 GDPGP1Q6ZNW5 385 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 TRMT10AQ8TBZ6 339 aaKnown RBP13.38□□□□□ -0.27
USP40-206ENST00000443711 NPRL2Q8WTW4 380 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 NINJ1Q92982 152 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 BORCS8Q96FH0 119 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 CHCHD6Q9BRQ6 235 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 FUNDC2Q9BWH2 189 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 SAP30LQ9HAJ7 183 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 TMEM138Q9NPI0 162 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 BEX4Q9NWD9 120 aaPredicted RBP13.38□□□□□ -0.27
USP40-206ENST00000443711 TXNL4BQ9NX01 149 aaKnown RBP13.38□□□□□ -0.27
USP40-206ENST00000443711 ARID1AO14497 2285 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 DYSFO75923 2080 aa13.38□□□□□ -0.27
USP40-206ENST00000443711 ANKRD17O75179 2603 aaKnown RBP13.38□□□□□ -0.27
USP40-206ENST00000443711 FBN2P35556 2912 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 TRAV8-7A0A075B6U6 113 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 LOC100289279A0A1B0GTE1 492 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 PQLC2LA1A4F0 135 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 MEGF11A6BM72 1044 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 AIREO43918 545 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 NCR1O76036 304 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 PTBP3O95758 552 aaKnown RBP13.37□□□□□ -0.27
USP40-206ENST00000443711 HPXP02790 462 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 ALDOBP05062 364 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 GRPP07492 148 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 HCKP08631 526 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 BDKRB2P30411 391 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 THBS2P35442 1172 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 RBP2P50120 134 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 FAM76BQ5HYJ3 339 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 C22orf42Q6IC83 251 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 LHFPL2Q6ZUX7 228 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 ERGIC1Q969X5 290 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 MBD6Q96DN6 1003 aa13.37□□□□□ -0.27
USP40-206ENST00000443711 FGF23Q9GZV9 251 aaPredicted RBP13.37□□□□□ -0.27
USP40-206ENST00000443711 PPIL3Q9H2H8 161 aaKnown RBP13.37□□□□□ -0.27
USP40-206ENST00000443711 BARX1Q9HBU1 254 aaPredicted RBP13.37□□□□□ -0.27
USP40-206ENST00000443711 LRP5LA4QPB2 252 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 MYL9P24844 172 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 CALRP27797 417 aaKnown RBP13.36□□□□□ -0.27
USP40-206ENST00000443711 GATA4P43694 442 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 PTH2RP49190 550 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 MTCP1P56278 107 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 DEFB113Q30KQ7 82 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 SPRNQ5BIV9 151 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 PRAMEF6Q5VXH4 476 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 ZNF573Q86YE8 665 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 OR51A2Q8NGJ7 313 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 RDH5Q92781 318 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 GSX2Q9BZM3 304 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 OR51I2Q9H344 312 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 FN3KRPQ9HA64 309 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 SNTG1Q9NSN8 517 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 PPP1R3CQ9UQK1 317 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 POLQO75417 2590 aa13.36□□□□□ -0.27
USP40-206ENST00000443711 ASH1LQ9NR48 2969 aaKnown RBP13.35□□□□□ -0.27
USP40-206ENST00000443711 TRAV1-2A0A0B4J238 106 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 IGHV1-69-2A0A0G2JMI3 117 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 IGHV3-64DA0A0J9YX35 117 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 TRIM64BA6NI03 449 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 A6NLC8 198 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 IFNL4K9M1U5 179 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 NDUFS7O75251 213 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 MAS1P04201 325 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 DAOP14920 347 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 ATP5J2P56134 94 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 MRPS11P82912 194 aaKnown RBP13.35□□□□□ -0.27
USP40-206ENST00000443711 ZNF154Q13106 437 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 GPR107Q5VW38 600 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 WDR86Q86TI4 376 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 CDH24Q86UP0 819 aa13.35□□□□□ -0.27
USP40-206ENST00000443711 MOGAT3Q86VF5 341 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms