RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FAM76BQ5HYJ3 339 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 GLT8D1Q68CQ7 371 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 TMEM200AQ86VY9 491 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 ZNF573Q86YE8 665 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 CROCCP3Q8IVE0 287 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 HPSE2Q8WWQ2 592 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 ERGIC1Q969X5 290 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 ELMOD3Q96FG2 381 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 BORCS8Q96FH0 119 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 UQCC2Q9BRT2 126 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 EGLN1Q9GZT9 426 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 METTL17Q9H7H0 456 aaPredicted RBP10.79□□□□□ -0.68
SCLT1-202ENST00000439369 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 EDARQ9UNE0 448 aa10.79□□□□□ -0.68
SCLT1-202ENST00000439369 LRP5LA4QPB2 252 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 CCDC160A6NGH7 325 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 H3BMQ9 156 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 IFNL4K9M1U5 179 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 CD8AP01732 235 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 IGHV1-46P01743 117 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 SOD3P08294 240 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 HCKP08631 526 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 ADRA2CP18825 462 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 RAB3BP20337 219 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 COL8A1P27658 744 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 SDC2P34741 201 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 GATA4P43694 442 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 CAPZA1P52907 286 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 VBP1P61758 197 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 NCS1P62166 190 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 RIN1Q13671 783 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 CEP78Q5JTW2 689 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 C1orf100Q5SVJ3 147 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 DDI2Q5TDH0 399 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 OR2Z1Q8NG97 314 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 IGFBPL1Q8WX77 278 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 ORAI1Q96D31 301 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 RNF170Q96K19 258 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 TLNRD1Q9H1K6 362 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 TENM4Q6N022 2769 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 PLCE1Q9P212 2302 aa10.78□□□□□ -0.68
SCLT1-202ENST00000439369 USP9YO00507 2555 aaPredicted RBP10.77□□□□□ -0.68
SCLT1-202ENST00000439369 NOTOA8MTQ0 251 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF732B4DXR9 585 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 CDRT1O95170 752 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 MAS1P04201 325 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 ACAA1P09110 424 aaPredicted RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 NAT2P11245 290 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 TNFRSF1AP19438 455 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 MPZP25189 248 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 MTCP1P56278 107 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 LSM3P62310 102 aaKnown RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 TNFAIP6P98066 277 aaPredicted RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 KISS1Q15726 138 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 LYPD6Q86Y78 171 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 SAXO1Q8IYX7 474 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 PNLDC1Q8NA58 520 aaKnown RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 ZSCAN4Q8NAM6 433 aaPredicted RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 OR10AD1Q8NGE0 317 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 OR6M1Q8NGM8 313 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 NEU4Q8WWR8 484 aaPredicted RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 C12orf43Q96C57 262 aaKnown RBP10.77□□□□□ -0.69
SCLT1-202ENST00000439369 MEGF10Q96KG7 1140 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 SORCS2Q96PQ0 1159 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 MRI1Q9BV20 369 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 PKIBQ9C010 78 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 DCSTAMPQ9H295 470 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 OR51I2Q9H344 312 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 RHOFQ9HBH0 211 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 V9GY05 133 aa10.77□□□□□ -0.69
SCLT1-202ENST00000439369 FAM230AA0A1W2PPH8 454 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 F5H5P2 479 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 H0YL77 283 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 J3QT63 122 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 OVOL3O00110 214 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 SLC17A2O00624 439 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 SPRY3O43610 288 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 UBBP0CG47 229 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 THBS2P35442 1172 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF93P35789 620 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-202ENST00000439369 CFHR2P36980 270 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 SERPINB10P48595 397 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 GPM6AP51674 278 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 MRPS11P82912 194 aaKnown RBP10.76□□□□□ -0.69
SCLT1-202ENST00000439369 IL24Q13007 206 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 MAB21L1Q13394 359 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 DYNC1I2Q13409 638 aaKnown RBP10.76□□□□□ -0.69
SCLT1-202ENST00000439369 OR52N4Q8NGI2 321 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 GTF3AQ92664 365 aaKnown RBP10.76□□□□□ -0.69
SCLT1-202ENST00000439369 SLC25A46Q96AG3 418 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 OR2V2Q96R30 315 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 FGF23Q9GZV9 251 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-202ENST00000439369 CXorf56Q9H5V9 222 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 RNF167Q9H6Y7 350 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 PPP1R3EQ9H7J1 279 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 FN3KRPQ9HA64 309 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms