RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PP6455Q8WZ26 134 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 CCL17Q92583 94 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 GHSRQ92847 366 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 BPESC1Q9GZL8 116 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 ISYNA1Q9NPH2 558 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 GPR173Q9NS66 373 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 TREM2Q9NZC2 230 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF281Q9Y2X9 895 aa12.13□□□□□ -0.47
CSTF3-202ENST00000431742 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 PQLC2LA1A4F0 135 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 CLDN25C9JDP6 229 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 TMEM178BH3BS89 294 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 GATBO75879 557 aaKnown RBP12.12□□□□□ -0.47
CSTF3-202ENST00000431742 CELP19835 753 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 RBMXP38159 391 aaKnown RBP12.12□□□□□ -0.47
CSTF3-202ENST00000431742 GNG3P63215 75 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 UBE2V2Q15819 145 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 YIF1BQ5BJH7 314 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF773Q6PK81 442 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 MOB3CQ70IA8 216 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 SPARTQ8N0X7 666 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF420Q8TAQ5 688 aaPredicted RBP12.12□□□□□ -0.47
CSTF3-202ENST00000431742 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 FGGYQ96C11 551 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 RNF170Q96K19 258 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 TECTBQ96PL2 329 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 REG4Q9BYZ8 158 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 ACOT13Q9NPJ3 140 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 UFSP2Q9NUQ7 469 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 DHDHQ9UQ10 334 aa12.12□□□□□ -0.47
CSTF3-202ENST00000431742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■□□□ 11.8
CSTF3-202ENST00000431742 PNMA8CA0A1B0GUJ8 204 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
CSTF3-202ENST00000431742 GRPP07492 148 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF20P17024 532 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 PCMT1P22061 227 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 GPR6P46095 362 aaPredicted RBP12.11□□□□□ -0.47
CSTF3-202ENST00000431742 GPM6AP51674 278 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 CHN2P52757 468 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 EMX1Q04741 257 aaPredicted RBP12.11□□□□□ -0.47
CSTF3-202ENST00000431742 MLLT11Q13015 90 aaPredicted RBP12.11□□□□□ -0.47
CSTF3-202ENST00000431742 GPR50Q13585 617 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 TPBGQ13641 420 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 ASPHD2Q6ICH7 369 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF367Q7RTV3 350 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 CIARTQ8N365 385 aaPredicted RBP12.11□□□□□ -0.47
CSTF3-202ENST00000431742 SVOPQ8N4V2 548 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 TSEN15Q8WW01 171 aaKnown RBP12.11□□□□□ -0.47
CSTF3-202ENST00000431742 HPS1Q92902 700 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 OPALINQ96PE5 141 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 HIST1H2AAQ96QV6 131 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 OR51I2Q9H344 312 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
CSTF3-202ENST00000431742 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 IGKV1-9A0A0C4DH69 117 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 LRRC30A6NM36 301 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF732B4DXR9 585 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 H7C1Q1 480 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 FSTL3O95633 263 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
CSTF3-202ENST00000431742 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 CFHR2P36980 270 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 LOXL1Q08397 574 aaPredicted RBP12.1□□□□□ -0.47
CSTF3-202ENST00000431742 CNN3Q15417 329 aaKnown RBP12.1□□□□□ -0.47
CSTF3-202ENST00000431742 Q499Y3 187 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 ZNF826PQ6ZT77 177 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 SCCPDHQ8NBX0 429 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 OR11L1Q8NGX0 322 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 RPL3LQ92901 407 aaKnown RBP12.1□□□□□ -0.47
CSTF3-202ENST00000431742 TIMD4Q96H15 378 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 MGLLQ99685 303 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 C1orf123Q9NWV4 160 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
CSTF3-202ENST00000431742 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 IGKV1-27A0A075B6S5 117 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 A6NLC8 198 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 WNT9BO14905 357 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 ALX3O95076 343 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 TNFAIP8O95379 198 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 SERPINA3P01011 423 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 LHBP01229 141 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 CD2P06729 351 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 OCM2P0CE71 109 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 CPEP16870 476 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 ATF1P18846 271 aa12.09□□□□□ -0.47
CSTF3-202ENST00000431742 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
CSTF3-202ENST00000431742 MPZP25189 248 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms