RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 AMDHD2Q9Y303 409 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 HMSDA8MTL9 139 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 TXNL1O43396 289 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 TLX3O43711 291 aaPredicted RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 ITGB2P05107 769 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 OR13C7P0DN81 318 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 NPBWR1P48145 328 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 CSNK1A1P48729 337 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 PAQR4Q8N4S7 273 aaPredicted RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 ASB10Q8WXI3 467 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 LRFN5Q96NI6 719 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 ZNF385AQ96PM9 386 aaKnown RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 A0A096LPE4 126 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 A0A1W2PPZ6 126 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 A6NIZ1 184 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 TSPAN2O60636 221 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 ACTL6AO96019 429 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 B4GALT1P15291 398 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 RAP1BP61224 184 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 RAP1AP62834 184 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 SULF2Q8IWU5 870 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 OR6K3Q8NGY3 331 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 SGK3Q96BR1 496 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 MVB12AQ96EY5 273 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 PAPOLGQ9BWT3 736 aaKnown RBP11.79□□□□□ -0.52
USP42-203ENST00000426246 EMC3Q9P0I2 261 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 TOX3O15405 576 aaPredicted RBP11.79□□□□□ -0.52
USP42-203ENST00000426246 HPP00738 406 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 GALNSP34059 522 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 KISS1Q15726 138 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 PLAC9Q5JTB6 97 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 OR52H1Q8NGJ2 320 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 LHFPL5Q8TAF8 219 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 RSRP1Q9BUV0 290 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 ZNF629Q9UEG4 869 aaPredicted RBP11.79□□□□□ -0.52
USP42-203ENST00000426246 MMACHCQ9Y4U1 282 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 H3BP45 60 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 EFSO43281 561 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 EFNA2O43921 213 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 PCK2Q16822 640 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 ADAM5Q6NVV9 412 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 ZSCAN4Q8NAM6 433 aaPredicted RBP11.79□□□□□ -0.52
USP42-203ENST00000426246 ZNF519Q8TB69 540 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 C14orf79Q96F83 325 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 ZNF845Q96IR2 970 aaPredicted RBP11.79□□□□□ -0.52
USP42-203ENST00000426246 ULBP2Q9BZM5 246 aa11.79□□□□□ -0.52
USP42-203ENST00000426246 TNFSF11O14788 317 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 DXOO77932 396 aaKnown RBP11.78□□□□□ -0.52
USP42-203ENST00000426246 ZNF260Q3ZCT1 412 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 FNDC7Q5VTL7 733 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 SULT4A1Q9BR01 284 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 TNFSF18Q9UNG2 199 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
USP42-203ENST00000426246 A0A1W2PR80 420 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 WIPF3A6NGB9 483 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 M0R296 226 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 CCL7P80098 99 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 ANKRD55Q3KP44 614 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 DTWD2Q8NBA8 298 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 OR14L1PQ8NHC6 308 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 OCIAD1Q9NX40 245 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 K7EPK0 472 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 IFNA21P01568 189 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 SLC23A3Q6PIS1 610 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 PGAP1Q75T13 922 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 C17orf78Q8N4C9 275 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 FAM71E2Q8N5Q1 922 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 APCDD1LQ8NCL9 501 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 OR10Z1Q8NGY1 313 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 KCNG3Q8TAE7 436 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 SLC22A8Q8TCC7 542 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 SECTM1Q8WVN6 248 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 SHARPINQ9H0F6 387 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 TAF9BQ9HBM6 251 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 RASL12Q9NYN1 266 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 LHFPL6Q9Y693 200 aa11.78□□□□□ -0.52
USP42-203ENST00000426246 E9PLN8 166 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 CRHP06850 196 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 IGFBP7Q16270 282 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 PDZD11Q5EBL8 140 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 Q6ZRG5 221 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 OR10S1Q8NGN2 331 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.52
USP42-203ENST00000426246 MED13LQ71F56 2210 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 TRAV39A0A0B4J263 110 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 IGHV5-10-1A0A0J9YXX1 117 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 H0YIZ8 118 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 CDC14BO60729 498 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 ARG1P05089 322 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 GP1BAP07359 652 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 ZBTB25P24278 435 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 DCAF7P61962 342 aa11.77□□□□□ -0.53
USP42-203ENST00000426246 SVBPQ8N300 66 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms