RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 S100A13Q99584 98 aa12.45□□□□□ -0.42
CDK3-201ENST00000425876 SLX1AQ9BQ83 275 aa12.45□□□□□ -0.42
CDK3-201ENST00000425876 CACNG6Q9BXT2 260 aa12.45□□□□□ -0.42
CDK3-201ENST00000425876 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
CDK3-201ENST00000425876 NUBP2Q9Y5Y2 271 aa12.45□□□□□ -0.42
CDK3-201ENST00000425876 ZFYVE26Q68DK2 2539 aa12.45□□□□□ -0.42
CDK3-201ENST00000425876 SVILO95425 2214 aa12.45□□□□□ -0.42
CDK3-201ENST00000425876 MPIG6BO95866 241 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 NGFP01138 241 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 HNRNPCP07910 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK3-201ENST00000425876 HOXC12P31275 282 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 FAUP35544 74 aaKnown RBP12.44□□□□□ -0.42
CDK3-201ENST00000425876 ATP1B3P54709 279 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 RAG2P55895 527 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 RPS27AP62979 156 aaKnown RBP12.44□□□□□ -0.42
CDK3-201ENST00000425876 WDR31Q8NA23 367 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 STEAP2Q8NFT2 490 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 OR56B2PQ8NGI1 322 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 OR56B1Q8NGI3 324 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 SFXN3Q9BWM7 321 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 TP63Q9H3D4 680 aaPredicted RBP12.44□□□□□ -0.42
CDK3-201ENST00000425876 ING4Q9UNL4 249 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 FAM208BQ5VWN6 2430 aa12.44□□□□□ -0.42
CDK3-201ENST00000425876 INMT-MINDY4F8WBC2 141 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 IGKV3-15P01624 115 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 TCRBP04435 133 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 GSTP1P09211 210 aaKnown RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 GIFP27352 417 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 VEGFCP49767 419 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CXADRP78310 365 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 PCGF3Q3KNV8 242 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CDNFQ49AH0 187 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 SLC22A6Q4U2R8 563 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 C1QTNF12Q5T7M4 302 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 MOB3CQ70IA8 216 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 BTN2A1Q7KYR7 527 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 C1QL2Q7Z5L3 287 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 GLCCI1Q86VQ1 547 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CISD2Q8N5K1 135 aaKnown RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 FAM169BQ8N8A8 192 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 PXT1Q8NFP0 134 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 PIGCQ92535 297 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 WBP1Q96G27 269 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 TM2D1Q9BX74 207 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 ACTR6Q9GZN1 396 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 OPN3Q9H1Y3 402 aaPredicted RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 MOV10Q9HCE1 1003 aaKnown RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 PTTG3PQ9NZH4 202 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 EIF3KQ9UBQ5 218 aaKnown RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 FAM230AA0A1W2PPH8 454 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 WIPF3A6NGB9 483 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CD300LBA8K4G0 201 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 PRRG2O14669 202 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 MT-ND4P03905 459 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 DMRTC1Q5HYR2 192 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 PLCXD3Q63HM9 321 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 FBXW12Q6X9E4 464 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 Q6ZTK2 550 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 RFPL4BQ6ZWI9 263 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CXorf67Q86X51 503 aaPredicted RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 ZSCAN4Q8NAM6 433 aaPredicted RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 TMEM229BQ8NBD8 167 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CHST4Q8NCG5 386 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 NAXEQ8NCW5 288 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 OR5D18Q8NGL1 313 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 METTL9Q9H1A3 318 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 CDH20Q9HBT6 801 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDK3-201ENST00000425876 IL36GQ9NZH8 169 aa12.43□□□□□ -0.42
CDK3-201ENST00000425876 MRPL15Q9P015 296 aaKnown RBP12.43□□□□□ -0.42
CDK3-201ENST00000425876 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 INTS1Q8N201 2190 aaKnown RBP12.42□□□□□ -0.42
CDK3-201ENST00000425876 A0A0B4J293 547 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 TMEM235A6NFC5 223 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 TMEM225BP0DP42 221 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 HIST1H1DP16402 221 aaKnown RBP12.42□□□□□ -0.42
CDK3-201ENST00000425876 MGMTP16455 207 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 PSMB1P20618 241 aaKnown RBP12.42□□□□□ -0.42
CDK3-201ENST00000425876 TUBG1P23258 451 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 CPT2P23786 658 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 IDH3GP51553 393 aaPredicted RBP12.42□□□□□ -0.42
CDK3-201ENST00000425876 PRSS12P56730 875 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 HLXQ14774 488 aaPredicted RBP12.42□□□□□ -0.42
CDK3-201ENST00000425876 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 TATDN3Q17R31 274 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 LINC00303Q3SY05 128 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
CDK3-201ENST00000425876 RAB3CQ96E17 227 aa12.42□□□□□ -0.42
CDK3-201ENST00000425876 POM121Q96HA1 1249 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms