RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PDZD3Q86UT5 571 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 NIT1Q86X76 327 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 WDFY1Q8IWB7 410 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 OR52N4Q8NGI2 321 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 KLHDC7BQ96G42 594 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SAP30LQ9HAJ7 183 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SLC17A4Q9Y2C5 497 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1W2PP64 1363 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ATRNL1Q5VV63 1379 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 CLEC18AA5D8T8 446 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 FBLN1P23142 703 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 CD96P40200 585 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 CAMPP49913 170 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 GPR18Q14330 331 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 CLEC18CQ8NCF0 446 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 DNERQ8NFT8 737 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 KHSRPQ92945 711 aaKnown RBP eCLIP4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF300Q96RE9 604 aaPredicted RBP4.15□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM134Q9H6X4 195 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 MMP26Q9NRE1 261 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 THAP10Q9P2Z0 257 aaPredicted RBP4.15□□□□□ -1.74
PTPN13-202ENST00000411767 DISP2A7MBM2 1401 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 PRG4Q92954 1404 aaPredicted RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 A0A0A6YYD4 124 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 OR11H12B2RN74 326 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 SDCBPO00560 298 aaPredicted RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 RRHO14718 337 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 HLA-DRB1P01911 266 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 CSN3P07498 182 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 C8orf89P0DMQ9 161 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 SMPD1P17405 629 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 GPX3P22352 226 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 GABRB3P28472 473 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 CNR2P34972 360 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 SEC13P55735 322 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 MRPS11P82912 194 aaKnown RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 SYPL1Q16563 259 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 CLEC6AQ6EIG7 209 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 MRPL43Q8N983 215 aaKnown RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF114Q8NC26 417 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 OR11H1Q8NG94 326 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 OR11H2Q8NH07 326 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 HSFX1Q9UBD0 423 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 USP21Q9UK80 565 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 GPR132Q9UNW8 380 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 MYO5CQ9NQX4 1742 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 ATP5LO75964 103 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 TNFRSF6BO95407 300 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 FAM157BP0CG42 384 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF865P0CJ78 1059 aaPredicted RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 UCP3P55916 312 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 LAMTOR4Q0VGL1 99 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 HYAL2Q12891 473 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 C2orf27AQ580R0 203 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 SPANXN4Q5MJ08 99 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 THAP3Q8WTV1 239 aaPredicted RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 TAC3Q9UHF0 121 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 HSF4Q9ULV5 492 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 VSIG4Q9Y279 399 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 TEX264Q9Y6I9 313 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 UHRF1BP1LA0JNW5 1464 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 ATP7BP35670 1465 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 A1L4Q6 167 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 PRRT4C9JH25 899 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 RPL12P30050 165 aaKnown RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 CA5AP35218 305 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 BTG1P62324 171 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 HBA1P69905 142 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 ISXQ2M1V0 245 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 PLBD1Q6P4A8 553 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 TTC9CQ8N5M4 171 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 OR9A1PQ8NGU1 263 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 RELTQ969Z4 430 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 EEF1AKMT3Q96AZ1 226 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 HSD17B10Q99714 261 aaKnown RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 PBOV1Q9GZY1 135 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 MRPL18Q9H0U6 180 aaKnown RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 MYOZ1Q9NP98 299 aaPredicted RBP4.15□□□□□ -1.75
PTPN13-202ENST00000411767 TBX21Q9UL17 535 aa4.15□□□□□ -1.75
PTPN13-202ENST00000411767 USP42Q9H9J4 1324 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 IGHV1-69-2A0A0G2JMI3 117 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 A0A1W2PP18 115 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 C9JVG2 144 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PPM1DO15297 605 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 LRP3O75074 770 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 KBTBD11O94819 623 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 UBL3O95164 117 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CD8AP01732 235 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TDGF1P13385 188 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 OSMP13725 252 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PMELP40967 661 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 NXPH1P58417 271 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 IL10RBQ08334 325 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SMIM21Q3B7S5 101 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 OR11H7Q8NGC8 314 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ACER1Q8TDN7 264 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PIGTQ969N2 578 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF775Q96BV0 537 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MISP3Q96FF7 219 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms