RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SLC31A2O15432 143 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 SHOX2O60902 331 aaPredicted RBP3.71□□□□□ -1.82
LSM5-206ENST00000409987 CTNSO60931 367 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 SNAP29O95721 258 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 RETP07949 1114 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 CCNE1P24864 410 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 COILP38432 576 aaPredicted RBP3.71□□□□□ -1.82
LSM5-206ENST00000409987 ACTR1BP42025 376 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 CDKN2CP42773 168 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 FGF8P55075 233 aaPredicted RBP3.71□□□□□ -1.82
LSM5-206ENST00000409987 OR12D2P58182 307 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 PPP1CBP62140 327 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 ARFRP1Q13795 201 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 TRAM1Q15629 374 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 UAP1Q16222 522 aaPredicted RBP3.71□□□□□ -1.82
LSM5-206ENST00000409987 OR10J3Q5JRS4 329 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 NIPAL1Q6NVV3 410 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 TMEM156Q8N614 296 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 OR8G5Q8NG78 346 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 OR2G3Q8NGZ4 309 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 ZFAND1Q8TCF1 268 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 DYNC2LI1Q8TCX1 351 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 HBEGFQ99075 208 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 VAT1Q99536 393 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 C20orf144Q9BQM9 153 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 GABARAPL3Q9BY60 117 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 DERL2Q9GZP9 239 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 PTGES2Q9H7Z7 377 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 SLC25A22Q9H936 323 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 ZNF702PQ9H963 129 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 SH2D2AQ9NP31 389 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 TNFRSF19Q9NS68 423 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 VNN3Q9NY84 501 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 RAB23Q9ULC3 237 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 USH1CQ9Y6N9 552 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 COL2A1P02458 1487 aaPredicted RBP3.71□□□□□ -1.82
LSM5-206ENST00000409987 PXDNQ92626 1479 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 MYOM1P52179 1685 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 RREB1Q92766 1687 aa3.71□□□□□ -1.82
LSM5-206ENST00000409987 MARF1Q9Y4F3 1742 aaKnown RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 AK9Q5TCS8 1911 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 FAM240AA0A1B0GVK7 77 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 SLC5A10A0PJK1 596 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 SLC31A1O15431 190 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CRXO43186 299 aaPredicted RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 CYTH3O43739 400 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 RDH16O75452 317 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 RBBP9O75884 186 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 RAB36O95755 333 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 IGHV3-23P01764 117 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 P0C879 139 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 HSPD1P10809 573 aaKnown RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 ERGP11308 486 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 COX7A1P24310 79 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 AQP5P55064 265 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 OR10A3P58181 314 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 SLC35A1P78382 337 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 CD164Q04900 197 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 PRPSAP1Q14558 356 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 ZNF266Q14584 549 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 KIAA0040Q15053 153 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CHRFAM7AQ494W8 412 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 ZNF658Q5TYW1 1059 aaPredicted RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 HBMQ6B0K9 141 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 THOC7Q6I9Y2 204 aaKnown RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 HSD17B13Q7Z5P4 300 aaPredicted RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 PGAM4Q8N0Y7 254 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 TMEM251Q8N6I4 163 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 OR4K2Q8NGD2 314 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 RNF133Q8WVZ7 376 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 IL22RA2Q969J5 263 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 NICN1Q9BSH3 213 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 NXF2Q9GZY0 626 aaKnown RBP3.7□□□□□ -1.82
LSM5-206ENST00000409987 COA1Q9GZY4 146 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 ARV1Q9H2C2 271 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 RGS18Q9NS28 235 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CD274Q9NZQ7 290 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CLEC4EQ9ULY5 219 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 TFR2Q9UP52 801 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 ZNF257Q9Y2Q1 563 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 UBIAD1Q9Y5Z9 338 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 KIAA0232Q92628 1395 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 ADGRL2O95490 1459 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CCDC141Q6ZP82 1450 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 FYCO1Q9BQS8 1478 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CASZ1Q86V15 1759 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 NUP188Q5SRE5 1749 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 NEXMIFQ5QGS0 1516 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CASKIN1Q8WXD9 1431 aa3.7□□□□□ -1.82
LSM5-206ENST00000409987 CEMIPQ8WUJ3 1361 aa3.69□□□□□ -1.82
LSM5-206ENST00000409987 COL6A3P12111 3177 aa3.69□□□□□ -1.82
LSM5-206ENST00000409987 KIR2DS1A0A191URI9 304 aa3.69□□□□□ -1.82
LSM5-206ENST00000409987 C9J4A7 227 aa3.69□□□□□ -1.82
LSM5-206ENST00000409987 H3BNH8 94 aa3.69□□□□□ -1.82
LSM5-206ENST00000409987 J3QLI3 93 aa3.69□□□□□ -1.82
LSM5-206ENST00000409987 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms