RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 GRPP07492 148 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 GPM6AP51674 278 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 DSCR9P59020 149 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 HFEQ30201 348 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 ARMCX4Q5H9R4 360 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 SERPINA12Q8IW75 414 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 PHC2Q8IXK0 858 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 MS4A15Q8N5U1 240 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 OR1M1Q8NGA1 313 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 ERGIC1Q969X5 290 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 TMED9Q9BVK6 235 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 CHODLQ9H9P2 273 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 TMEM210A6NLX4 147 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 CD2P06729 351 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 GNG3P63215 75 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 HNRNPA0Q13151 305 aaKnown RBP24.78■■□□□ 1.56
USP42-202ENST00000404008 CARTPTQ16568 116 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 FAM76BQ5HYJ3 339 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 KCTD8Q6ZWB6 473 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 C10orf105Q8TEF2 133 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 FAM168AQ92567 244 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 CCL17Q92583 94 aa24.78■■□□□ 1.56
USP42-202ENST00000404008 ZNF732B4DXR9 585 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 INMTO95050 263 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 ZNF154Q13106 437 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 ZNF420Q8TAQ5 688 aaPredicted RBP24.77■■□□□ 1.56
USP42-202ENST00000404008 OR14A2Q96R54 314 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 TLNRD1Q9H1K6 362 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 ZCCHC4Q9H5U6 513 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 FN3KRPQ9HA64 309 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 UFSP2Q9NUQ7 469 aa24.77■■□□□ 1.56
USP42-202ENST00000404008 ITPR3Q14573 2671 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 CELSR1Q9NYQ6 3014 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 IGKV1-9A0A0C4DH69 117 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 ZNF879B4DU55 563 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 NDUFS8O00217 210 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 GIFP27352 417 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 PSMB9P28065 219 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 PMELP40967 661 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 RIN1Q13671 783 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 CNN3Q15417 329 aaKnown RBP24.76■■□□□ 1.55
USP42-202ENST00000404008 NEDD8Q15843 81 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 SSX1Q16384 188 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 ASPHD2Q6ICH7 369 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 WFDC11Q8NEX6 87 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 OR5D14Q8NGL3 314 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 Q8TCH9 128 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 TMEM106BQ9NUM4 274 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 SLC7A11Q9UPY5 501 aa24.76■■□□□ 1.55
USP42-202ENST00000404008 PQLC2LA1A4F0 135 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 TRIM64CA6NLI5 447 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 IFNL4K9M1U5 179 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 ATF1P18846 271 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 RBMXP38159 391 aaKnown RBP24.75■■□□□ 1.55
USP42-202ENST00000404008 ZNF181Q2M3W8 571 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 C11orf53Q8IXP5 236 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 OR13C9Q8NGT0 318 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 NPRL2Q8WTW4 380 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 Q96MF0 132 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 DCAF16Q9NXF7 216 aa24.75■■□□□ 1.55
USP42-202ENST00000404008 SF3B6Q9Y3B4 125 aaKnown RBP24.75■■□□□ 1.55
USP42-202ENST00000404008 IGHV4-30-2A0A087WSY4 118 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 TRBV5-7A0A0A0MS05 114 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 LRP5LA4QPB2 252 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 TMEM33P57088 247 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 RPS25P62851 125 aaKnown RBP24.74■■□□□ 1.55
USP42-202ENST00000404008 TRAM1Q15629 374 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 ZNF529Q6P280 563 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 TRMT10AQ8TBZ6 339 aaKnown RBP24.74■■□□□ 1.55
USP42-202ENST00000404008 THRSPQ92748 146 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 TMEM203Q969S6 136 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 DERL3Q96Q80 235 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 OR51I2Q9H344 312 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 C1orf123Q9NWV4 160 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 NDUFB11Q9NX14 153 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 TAS2R4Q9NYW5 299 aa24.74■■□□□ 1.55
USP42-202ENST00000404008 A6NLC8 198 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 SC5DO75845 299 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 ALX3O95076 343 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 GABRA5P31644 462 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 FUT6P51993 359 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 INSL4Q14641 139 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 ACSM3Q53FZ2 586 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 SYT6Q5T7P8 510 aaPredicted RBP24.73■■□□□ 1.55
USP42-202ENST00000404008 RPL3LQ92901 407 aaKnown RBP24.73■■□□□ 1.55
USP42-202ENST00000404008 MUL1Q969V5 352 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 SPSB1Q96BD6 273 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 PIMREGQ9BSJ6 248 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 MAST4O15021 2626 aa24.73■■□□□ 1.55
USP42-202ENST00000404008 ZNF469Q96JG9 3925 aaPredicted RBP24.72■■□□□ 1.55
USP42-202ENST00000404008 FAM230AA0A1W2PPH8 454 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 LRRC30A6NM36 301 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 CLDN25C9JDP6 229 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 SULT1B1O43704 296 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 AZGP1P25311 298 aaKnown RBP24.72■■□□□ 1.55
USP42-202ENST00000404008 PSMA1P25786 263 aaKnown RBP24.72■■□□□ 1.55
USP42-202ENST00000404008 MAPK3P27361 379 aaPredicted RBP24.72■■□□□ 1.55
USP42-202ENST00000404008 UNQ9370/PRO34162Q6UXP9 181 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 ZNF826PQ6ZT77 177 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 SCCPDHQ8NBX0 429 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms