RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PIGCQ92535 297 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 PIGQQ9BRB3 760 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF2Q9BSG1 426 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF442Q9H7R0 627 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 OPN4Q9UHM6 478 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 FLVCR1Q9Y5Y0 555 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 HCFC1P51610 2035 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 C9orf170A2RU37 121 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 KLK3P07288 261 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 H2BFSP57053 126 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 DMWDQ09019 674 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 MYBPHQ13203 477 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 MFAP5Q13361 173 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 RBM39Q14498 530 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 TMPPEQ6ZT21 453 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 KCNG3Q8TAE7 436 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 CD300LFQ8TDQ1 290 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ROBO4Q8WZ75 1007 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 PADI1Q9ULC6 663 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 MTCH2Q9Y6C9 303 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 LOC105371267A0A1B0GV96 52 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF705EA8MWA4 302 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 GLRA1P23415 457 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ASCL1P50553 236 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF121P58317 390 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 SNTB1Q13884 538 aaKnown RBP4.38□□□□□ -1.71
SMAD4-202ENST00000398417 BRICD5Q6PL45 260 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 RABEPKQ7Z6M1 372 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM68Q96MH6 324 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 OXGR1Q96P68 337 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 SCN4AP35499 1836 aa4.38□□□□□ -1.71
SMAD4-202ENST00000398417 MFSD2BA6NFX1 497 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 IGHV3-9P01782 118 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 NMBP08949 121 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ZP3P21754 424 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 RSU1Q15404 277 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 NKAIN1Q4KMZ8 207 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SLC36A1Q7Z2H8 476 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR2W3Q7Z3T1 314 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 BVESQ8NE79 360 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR56B1Q8NGI3 324 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR13G1Q8NGZ3 307 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 WNT2BQ93097 391 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 NECAB3Q96P71 396 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CMSS1Q9BQ75 279 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SLC25A32Q9H2D1 315 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 PLEKHJ1Q9NW61 149 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF629Q9UEG4 869 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 IGKV3D-11A0A0A0MRZ8 115 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SHOXO15266 292 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 RD3LP0DJH9 198 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 VAMP2P63027 116 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 IAH1Q2TAA2 248 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TRIM61Q5EBN2 209 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CLVS2Q5SYC1 327 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 FNDC7Q5VTL7 733 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF660Q6AZW8 331 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OPN5Q6U736 354 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 AAED1Q7RTV5 226 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 NAA40Q86UY6 237 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SLC26A10Q8NG04 563 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR2M3Q8NG83 312 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 OR2D3Q8NGH3 330 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HGDQ93099 445 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF501Q96CX3 271 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CYYR1Q96J86 154 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TMEM140Q9NV12 185 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CLDN16Q9Y5I7 305 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 C9J4A7 227 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TSTD3H0UI37 97 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 MED6O75586 246 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TSPAN13O95857 204 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 PLGLAQ15195 96 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 EXT1Q16394 746 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CLEC18BQ6UXF7 455 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 MEX3BQ6ZN04 569 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF596Q8TC21 504 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 PPP1R1CQ8WVI7 109 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ADAT1Q9BUB4 502 aaKnown RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 LPAR5Q9H1C0 372 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 UBE2ZQ9H832 354 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-202ENST00000398417 C1orf123Q9NWV4 160 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SLC5A6Q9Y289 635 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HSPB2A8KAH6 182 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 FTCDNL1E5RQL4 147 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 LTBRP36941 435 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 DHRS2Q13268 280 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SCGB2A2Q13296 93 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 VAMP3Q15836 100 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 HSPB2Q16082 182 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 LIPHQ8WWY8 451 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 FAM131CQ96AQ9 280 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 SHDQ96IW2 340 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 CHRDQ9H2X0 955 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 DENND4AQ7Z401 1863 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 ANK1P16157 1881 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 TRAV14DV4A0A0A6YYC5 116 aa4.37□□□□□ -1.71
SMAD4-202ENST00000398417 H0Y8G0 127 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms