RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 OIT3Q8WWZ8 545 aa8.12□□□□□ -1.11
CAPN3-206ENST00000397163 TSLPQ969D9 159 aa8.12□□□□□ -1.11
CAPN3-206ENST00000397163 BSCL2Q96G97 398 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-206ENST00000397163 RPP25Q9BUL9 199 aaKnown RBP8.12□□□□□ -1.11
CAPN3-206ENST00000397163 PBOV1Q9GZY1 135 aa8.12□□□□□ -1.11
CAPN3-206ENST00000397163 PARP11Q9NR21 331 aa8.12□□□□□ -1.11
CAPN3-206ENST00000397163 TMEM150CB9EJG8 249 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 CYTIPO60759 359 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 TSPAN15O95858 294 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 CST4P01036 141 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 GSTP1P09211 210 aaKnown RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 HKR1P10072 659 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 MYOGP15173 224 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 HIST1H1DP16402 221 aaKnown RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 BCKDHBP21953 392 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 PAX6P26367 422 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 TNFRSF4P43489 277 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RELQ04864 619 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 PLCXD2Q0VAA5 305 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF239Q16600 458 aaKnown RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 C14orf28Q4W4Y0 310 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 DEGS2Q6QHC5 323 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 LRP11Q86VZ4 500 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 GPR119Q8TDV5 335 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 SLAMF6Q96DU3 332 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 GPER1Q99527 375 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 MESP1Q9BRJ9 268 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RTBDNQ9BSG5 229 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 SOHLH2Q9NX45 425 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 IGKV1D-43A0A0B4J1Z2 117 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 A0A1W2PP11 408 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 A6NIZ1 184 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 CRTAPO75718 401 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 F10P00742 488 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 EDN3P14138 238 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RPL12P30050 165 aaKnown RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 FCGR2CP31995 323 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RAP1BP61224 184 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RAP1AP62834 184 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 CSNK2A1P68400 391 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 HMGN3Q15651 99 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 IAH1Q2TAA2 248 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-206ENST00000397163 Q7L0L9 218 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 CSNK2A3Q8NEV1 391 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 OR13G1Q8NGZ3 307 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 OR51E1Q8TCB6 317 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RNF133Q8WVZ7 376 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 ARHGAP5-AS1Q96IT6 56 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 OR5B2Q96R09 309 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 GABRG3Q99928 467 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 TMEM59Q9BXS4 323 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 FAM206AQ9NX38 181 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 EHFQ9NZC4 300 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 FBXL17Q9UF56 701 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 POMT1Q9Y6A1 747 aa8.11□□□□□ -1.11
CAPN3-206ENST00000397163 RAMP1O60894 148 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 NPIPB7O75200 414 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 RAD51DO75771 328 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 HCKP08631 526 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 MDKP21741 143 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 RPS23P62266 143 aaKnown RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 YPEL5P62699 121 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 OR9K2Q8NGE7 335 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 KCNG3Q8TAE7 436 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 MR1Q95460 341 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 TCTN2Q96GX1 697 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 PARPBPQ9NWS1 579 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 MED29Q9NX70 200 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 POLR1DQ9Y2S0 133 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 GON4LQ3T8J9 2241 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 ALG1L2C9J202 215 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 CDC14BO60729 498 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 JTBO76095 146 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 IGHMP01871 453 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 MBP02144 154 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF708P17019 499 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 RBMXP38159 391 aaKnown RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 OR3A4PP47883 348 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 POU3F1Q03052 451 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 LCN10Q6JVE6 187 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 PARM1Q6UWI2 310 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 GRINAQ7Z429 371 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 PEG10Q86TG7 708 aaKnown RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 APCDD1LQ8NCL9 501 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 OR14K1Q8NGZ2 314 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 C11orf40Q8WZ69 217 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 ADIPOR1Q96A54 375 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 C5orf34Q96MH7 638 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 TAAR9Q96RI9 348 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 NKX2-4Q9H2Z4 354 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 COLQQ9Y215 455 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 B3GALT5Q9Y2C3 310 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 LSM5Q9Y4Y9 91 aaKnown RBP8.1□□□□□ -1.11
CAPN3-206ENST00000397163 SCGB1D2O95969 90 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 CXCL1P09341 107 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 SLC2A1P11166 492 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 GALNSP34059 522 aa8.1□□□□□ -1.11
CAPN3-206ENST00000397163 APLNRP35414 380 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms