RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SPATA2Q9UM82 520 aa13.21□□□□□ -0.29
VAMP1-202ENST00000396308 RTTNQ86VV8 2226 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 LOC100289279A0A1B0GTE1 492 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 SNRPBP14678 240 aaKnown RBP13.2□□□□□ -0.3
VAMP1-202ENST00000396308 GNG3P63215 75 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 SNTB1Q13884 538 aaKnown RBP13.2□□□□□ -0.3
VAMP1-202ENST00000396308 NKPD1Q17RQ9 610 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 KRT74Q7RTS7 529 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 TMEM171Q8WVE6 324 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 TNFAIP8L1Q8WVP5 186 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
VAMP1-202ENST00000396308 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 PIK3IP1Q96FE7 263 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 RNF170Q96K19 258 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 CMTM3Q96MX0 182 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 CST11Q9H112 138 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 CNTD2Q9H8S5 307 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 PCDHB16Q9NRJ7 776 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
VAMP1-202ENST00000396308 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
VAMP1-202ENST00000396308 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 HPGDSO60760 199 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 APOA1P02647 267 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 TMEM225BP0DP42 221 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 THBS2P35442 1172 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 POU3F4P49335 361 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 ART1P52961 327 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 CLDN12P56749 244 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 GPR176Q14439 515 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 ZNF846Q147U1 533 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 OR5P3Q8WZ94 311 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 DIRAS2Q96HU8 199 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 WDFY2Q96P53 400 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 SYT3Q9BQG1 590 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 PLK3Q9H4B4 646 aa13.19□□□□□ -0.3
VAMP1-202ENST00000396308 ELL3Q9HB65 397 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-202ENST00000396308 MAST4O15021 2626 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 CFAP46Q8IYW2 2715 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 PQLC2LA1A4F0 135 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 ZNF732B4DXR9 585 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 CLDN25C9JDP6 229 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 CTDSP2O14595 271 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 SCGNO76038 276 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 GOSR1O95249 250 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 CD37P11049 281 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 TNFSF4P23510 183 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 PTGFRP43088 359 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 OR3A4PP47883 348 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 GPM6AP51674 278 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 RSU1Q15404 277 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 BAIAP2L2Q6UXY1 529 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 OR2W3Q7Z3T1 314 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 OR51D1Q8NGF3 324 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 OR5D18Q8NGL1 313 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 ITPKCQ96DU7 683 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 CXXC4Q9H2H0 198 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 TAAR3PQ9P1P4 343 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 RABL2AQ9UBK7 228 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-202ENST00000396308 ING4Q9UNL4 249 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 RABL2BQ9UNT1 228 aa13.18□□□□□ -0.3
VAMP1-202ENST00000396308 KLF2Q9Y5W3 355 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-202ENST00000396308 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 A0A0B4J203 849 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 ZNF780AO75290 641 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-202ENST00000396308 KDM4BO94953 1096 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 PAHP00439 452 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 PLATP00750 562 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
VAMP1-202ENST00000396308 ZNF45Q02386 682 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 MKXQ8IYA7 352 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 ZSCAN4Q8NAM6 433 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-202ENST00000396308 KCNG3Q8TAE7 436 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 HPSE2Q8WWQ2 592 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 DVL3Q92997 716 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-202ENST00000396308 PTX4Q96A99 478 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
VAMP1-202ENST00000396308 MRPL37Q9BZE1 423 aaKnown RBP13.17□□□□□ -0.3
VAMP1-202ENST00000396308 METTL9Q9H1A3 318 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 RHBDL2Q9NX52 303 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 OR5V1Q9UGF6 321 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 POLDIP2Q9Y2S7 368 aa13.17□□□□□ -0.3
VAMP1-202ENST00000396308 NBASA2RRP1 2371 aa13.16□□□□□ -0.3
VAMP1-202ENST00000396308 LRP5LA4QPB2 252 aa13.16□□□□□ -0.3
VAMP1-202ENST00000396308 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
VAMP1-202ENST00000396308 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
VAMP1-202ENST00000396308 LILRA1O75019 489 aa13.16□□□□□ -0.3
VAMP1-202ENST00000396308 OR4A8P0C604 315 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms