RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 LALBAP00709 142 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 IGHV2-70P01814 119 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 THBS2P35442 1172 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 MLLT11Q13015 90 aaPredicted RBP13.92□□□□□ -0.18
CXCL1-201ENST00000395761 TPBGQ13641 420 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 ALKBH1Q13686 389 aaKnown RBP13.92□□□□□ -0.18
CXCL1-201ENST00000395761 DOC2BQ14184 412 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 ZMYND11Q15326 602 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 MED22Q15528 200 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF181Q2M3W8 571 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 SYT6Q5T7P8 510 aaPredicted RBP13.92□□□□□ -0.18
CXCL1-201ENST00000395761 Q6ZSR3 168 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF826PQ6ZT77 177 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 DOK3Q7L591 496 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 PEG10Q86TG7 708 aaKnown RBP13.92□□□□□ -0.18
CXCL1-201ENST00000395761 C11orf53Q8IXP5 236 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 FTMTQ8N4E7 242 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 HPSE2Q8WWQ2 592 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 HPS1Q92902 700 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 ERGIC1Q969X5 290 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 MSI2Q96DH6 328 aaKnown RBP13.92□□□□□ -0.18
CXCL1-201ENST00000395761 MGLLQ99685 303 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 FN3KRPQ9HA64 309 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 VCX3AQ9NNX9 186 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 C14orf119Q9NWQ9 140 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 C1orf123Q9NWV4 160 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 YLPM1P49750 1951 aaKnown RBP13.92□□□□□ -0.18
CXCL1-201ENST00000395761 A0A1B0GVI7 797 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 ANXA2P2A6NMY6 339 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 IFNL4K9M1U5 179 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 SYT7O43581 403 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 PLPP2O43688 288 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 MTRF1O75570 445 aaKnown RBP13.91□□□□□ -0.18
CXCL1-201ENST00000395761 GTF2A1P52655 376 aaPredicted RBP13.91□□□□□ -0.18
CXCL1-201ENST00000395761 BTG1P62324 171 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 MZT1Q08AG7 82 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 CEP78Q5JTW2 689 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 ZBTB37Q5TC79 503 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 CYB5R2Q6BCY4 276 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 DMKNQ6E0U4 476 aaPredicted RBP13.91□□□□□ -0.18
CXCL1-201ENST00000395761 MOB3CQ70IA8 216 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 LRRC28Q86X40 367 aaPredicted RBP13.91□□□□□ -0.18
CXCL1-201ENST00000395761 ZDHHC23Q8IYP9 409 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 OR1M1Q8NGA1 313 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 OR11L1Q8NGX0 322 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 ITFG2Q969R8 447 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 MUL1Q969V5 352 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 RNF170Q96K19 258 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 MICU1Q9BPX6 476 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 ENPP5Q9UJA9 477 aa13.91□□□□□ -0.18
CXCL1-201ENST00000395761 SIRT4Q9Y6E7 314 aaPredicted RBP13.91□□□□□ -0.18
CXCL1-201ENST00000395761 ABCA1O95477 2261 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 LOC107986453A0A1B0GWG9 222 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 A6NLC8 198 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 LRRC30A6NM36 301 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 OR4C45A6NMZ5 311 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 FAM157AC9JC47 383 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 TFAP2AP05549 437 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 CPEP16870 476 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
CXCL1-201ENST00000395761 GZMKP49863 264 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF154Q13106 437 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 CDK5R1Q15078 307 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 CEACAM21Q3KPI0 293 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 TMEM42Q69YG0 159 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 C19orf18Q8NEA5 215 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 OR10AC1Q8NH08 325 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 OPALINQ96PE5 141 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 HIST1H2AAQ96QV6 131 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 GAL3ST1Q99999 423 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 RTL8AQ9BWD3 113 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 METTL17Q9H7H0 456 aaPredicted RBP13.9□□□□□ -0.18
CXCL1-201ENST00000395761 TMEM165Q9HC07 324 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 YAE1D1Q9NRH1 226 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 GPR173Q9NS66 373 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 RNF7Q9UBF6 113 aa13.9□□□□□ -0.18
CXCL1-201ENST00000395761 TRBV2A0A0J9YWF9 115 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 TMEM212A6NML5 194 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 INMTO95050 263 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 NRASP01111 189 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 IGHV2-5P01817 119 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 ISG15P05161 165 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 UBCP0CG48 685 aaKnown RBP13.89□□□□□ -0.19
CXCL1-201ENST00000395761 IRF2P14316 349 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 GPM6AP51674 278 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 NEDD8Q15843 81 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 TMEM244Q5VVB8 128 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 BOLLQ8N9W6 283 aaKnown RBP13.89□□□□□ -0.19
CXCL1-201ENST00000395761 RPL3LQ92901 407 aaKnown RBP13.89□□□□□ -0.19
CXCL1-201ENST00000395761 SMIM19Q96E16 107 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 C1orf159Q96HA4 380 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 ZNF665Q9H7R5 613 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 ABCB9Q9NP78 766 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 ABCA2Q9BZC7 2435 aa13.89□□□□□ -0.19
CXCL1-201ENST00000395761 PPIAL4EA0A075B759 164 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 hCG_1807616A0A1W2PRN6 198 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 DHRS7CA6NNS2 312 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 ZNF732B4DXR9 585 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms