RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 DCHS2Q6V1P9 2916 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 H0YL77 283 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 NCR1O76036 304 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 GABARAPO95166 117 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 ZNF20P17024 532 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 CA6P23280 308 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 TEX36Q5VZQ5 186 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 TMEM106AQ96A25 262 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 ELMOD3Q96FG2 381 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 METTL17Q9H7H0 456 aaPredicted RBP11.22□□□□□ -0.61
USP44-202ENST00000393091 GCM1Q9NP62 436 aa11.22□□□□□ -0.61
USP44-202ENST00000393091 ZNF850A8MQ14 1090 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 NAT2P11245 290 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 RAB3AP20336 220 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 C11orf91Q3C1V1 193 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 ELP2Q6IA86 826 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 SLC16A12Q6ZSM3 486 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 ZNF573Q86YE8 665 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 ZFP41Q8N8Y5 198 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 OR14A2Q96R54 314 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 TMEM138Q9NPI0 162 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 LAMP3Q9UQV4 416 aa11.21□□□□□ -0.61
USP44-202ENST00000393091 ANXA2P2A6NMY6 339 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 IGHV4-39P01824 125 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 THBS2P35442 1172 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 BMXP51813 675 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 SCAND1P57086 179 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 TNFAIP6P98066 277 aaPredicted RBP11.21□□□□□ -0.62
USP44-202ENST00000393091 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 CEP78Q5JTW2 689 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 PAPOLGQ9BWT3 736 aaKnown RBP11.21□□□□□ -0.62
USP44-202ENST00000393091 FN3KRPQ9HA64 309 aa11.21□□□□□ -0.62
USP44-202ENST00000393091 IGKV1-27A0A075B6S5 117 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 KDM4BO94953 1096 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 SRMP19623 302 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 TMBIM6P55061 237 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 ZNF420Q8TAQ5 688 aaPredicted RBP11.2□□□□□ -0.62
USP44-202ENST00000393091 TSEN15Q8WW01 171 aaKnown RBP11.2□□□□□ -0.62
USP44-202ENST00000393091 AQP3Q92482 292 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 C12orf43Q96C57 262 aaKnown RBP11.2□□□□□ -0.62
USP44-202ENST00000393091 PLEKHA1Q9HB21 404 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 DYNLRB1Q9NP97 96 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 NOX4Q9NPH5 578 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 TXNL4BQ9NX01 149 aaKnown RBP11.2□□□□□ -0.62
USP44-202ENST00000393091 GHRLQ9UBU3 117 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 SCOCQ9UIL1 159 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 SLC7A11Q9UPY5 501 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 DYSFO75923 2080 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 J3QT63 122 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 CD36P16671 472 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 AZGP1P25311 298 aaKnown RBP11.2□□□□□ -0.62
USP44-202ENST00000393091 PSMB9P28065 219 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 PSMD7P51665 324 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 HIST2H2BCQ6DN03 193 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 POC1AQ8NBT0 407 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 OR13C5Q8NGS8 318 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 HPS1Q92902 700 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 OR2V2Q96R30 315 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 DNTTIP1Q9H147 329 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
USP44-202ENST00000393091 IFT22Q9H7X7 185 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 CHODLQ9H9P2 273 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 GTF2A1LQ9UNN4 478 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 BDKRB2P30411 391 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 PMELP40967 661 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 MAGEB1P43366 347 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 NEDD8Q15843 81 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 SHEQ5VZ18 495 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 CDH24Q86UP0 819 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 OR2Z1Q8NG97 314 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 MSL2Q9HCI7 577 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 CKLFQ9UBR5 152 aa11.2□□□□□ -0.62
USP44-202ENST00000393091 RBP2P50120 134 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 CAPZA1P52907 286 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 ATP1B3P54709 279 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 BLMHQ13867 455 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 ATPAF1Q5TC12 328 aaPredicted RBP11.19□□□□□ -0.62
USP44-202ENST00000393091 CEACAM19Q7Z692 300 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 Q8IYB0 196 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 PIGCQ92535 297 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 YIPF5Q969M3 257 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 GFI1Q99684 422 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 TMED9Q9BVK6 235 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
USP44-202ENST00000393091 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 LIME1Q9H400 295 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 SNTG1Q9NSN8 517 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 TAS2R4Q9NYW5 299 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
USP44-202ENST00000393091 TRAV8-7A0A075B6U6 113 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 A0A096LNT2 108 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 SRRM5B3KS81 715 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 PGA5P0DJD9 388 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 TMEM33P57088 247 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 ZNF154Q13106 437 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 CTF1Q16619 201 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 HSD17B12Q53GQ0 312 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 PLCXD3Q63HM9 321 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 WDR82Q6UXN9 313 aa11.19□□□□□ -0.62
USP44-202ENST00000393091 MOB3CQ70IA8 216 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms