RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NUDT16L1Q9BRJ7 211 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 LHX6Q9UPM6 363 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 POLR2AP24928 1970 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SHISA3A0PJX4 238 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 CTLA4P16410 223 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 OR3A4PP47883 348 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 RPS15P62841 145 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 RNF4P78317 190 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 HNF4GQ14541 408 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 KISS1Q15726 138 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 TMEM31Q5JXX7 168 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 PARM1Q6UWI2 310 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 TMEM123Q8N131 208 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 PCOLCE2Q9UKZ9 415 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 NOSIPQ9Y314 301 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SEC11BP0C7V7 166 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 ZBTB25P24278 435 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 OTX2P32243 289 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 CSNK1EP49674 416 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 DHRS7BQ6IAN0 325 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 ADAD2Q8NCV1 583 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 TM4SF19Q96DZ7 209 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SDSLQ96GA7 329 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 RLFQ13129 1914 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 IGKV1-8A0A0C4DH67 115 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 A0A1W2PPC1 479 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 CLDN34H7C241 214 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 CYTIPO60759 359 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 GAPDHP04406 335 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SULT1A2P50226 295 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SELENOVP59797 346 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SRYQ05066 204 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SHHQ15465 462 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 FAM74A3Q4VXF1 159 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 TMEM196Q5HYL7 178 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 THNSL2Q86YJ6 484 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 PUSL1Q8N0Z8 303 aaKnown RBP7.82□□□□□ -1.16
PCDH9-202ENST00000377865 NAT6Q93015 286 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 KLHDC2Q9Y2U9 406 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SLCO1B1Q9Y6L6 691 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 SBF1O95248 1867 aa7.82□□□□□ -1.16
PCDH9-202ENST00000377865 CENPVL1A0A0U1RR11 272 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 RBFOX3A6NFN3 312 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 F6UZH7 168 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ENDOGQ14249 297 aaKnown RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 TESK1Q15569 626 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 VAX1Q5SQQ9 334 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 PRAMEF20Q5VT98 475 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OTPQ5XKR4 325 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 DPPA3Q6W0C5 159 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR10D4PQ8NGN7 298 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR2AE1Q8NHA4 323 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 KCNE4Q8WWG9 221 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 MRGPRX1Q96LB2 322 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 SMIM7Q9BQ49 75 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 PBX4Q9BYU1 374 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 HIPK2Q9H2X6 1198 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 CA14Q9ULX7 337 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 TNS1Q9HBL0 1735 aaKnown RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 C7orf77A4D0Y5 90 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 NXPH3O95157 252 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ADRA2AP08913 450 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ELLP55199 621 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 H2BFSP57053 126 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 SLC36A1Q7Z2H8 476 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 BAGE3Q86Y29 109 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 BAGE2Q86Y30 109 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR6C1Q96RD1 312 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 PATZ1Q9HBE1 687 aaKnown RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 PSENENQ9NZ42 101 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 WSB1Q9Y6I7 421 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR2J2O76002 312 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OPRM1P35372 400 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 CLDN15P56746 228 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR1D5P58170 312 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ZNF813Q6ZN06 617 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ARV1Q9H2C2 271 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 B3GAT1Q9P2W7 334 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 SERGEFQ9UGK8 458 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 CBY1Q9Y3M2 126 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 GBF1Q92538 1859 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 UPK3AO75631 287 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ASAH2BP0C7U1 165 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 JMJD7P0C870 316 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 HOXB1P14653 301 aaPredicted RBP7.81□□□□□ -1.16
PCDH9-202ENST00000377865 RAB35Q15286 201 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 GUCA2BQ16661 112 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 IGSF11Q5DX21 431 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 UBAC2Q8NBM4 344 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 NRTNQ99748 197 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 SLC2A8Q9NY64 477 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 PIN1P1O15428 100 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 ADAP1O75689 374 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 CD74P04233 296 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 OR8U8P0C7N1 319 aa7.81□□□□□ -1.16
PCDH9-202ENST00000377865 KITLGP21583 273 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms