RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ARMCX4Q5H9R4 360 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 SYT6Q5T7P8 510 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 LIPKQ5VXJ0 399 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 ZNF529Q6P280 563 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 MOB3CQ70IA8 216 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 ZNF573Q86YE8 665 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 PHC2Q8IXK0 858 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 ZNF525Q8N782 197 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 ZFP41Q8N8Y5 198 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 OR1M1Q8NGA1 313 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 OR11L1Q8NGX0 322 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 C10orf105Q8TEF2 133 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 CPNE2Q96FN4 548 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 RNF170Q96K19 258 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 PIMREGQ9BSJ6 248 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 ZCCHC4Q9H5U6 513 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
NSMCE1-201ENST00000361439 PQLC2LA1A4F0 135 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 CLDN25C9JDP6 229 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 SULT1B1O43704 296 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 SC5DO75845 299 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 GALP22466 123 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 COL8A2P25067 703 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 GPM6AP51674 278 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 ZNF154Q13106 437 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 UBE2V2Q15819 145 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 CEP78Q5JTW2 689 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 SPNS3Q6ZMD2 512 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 PEG10Q86TG7 708 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 KRTAP1-3Q8IUG1 177 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 OR10Z1Q8NGY1 313 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 CCL17Q92583 94 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 YIPF5Q969M3 257 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 TIMD4Q96H15 378 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 OR51I2Q9H344 312 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 GPR173Q9NS66 373 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 NDUFB11Q9NX14 153 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 MAST4O15021 2626 aa11.68□□□□□ -0.54
NSMCE1-201ENST00000361439 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 PNMA8CA0A1B0GUJ8 204 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 TRIM64BA6NI03 449 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 A6NIN4 97 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 ZNF732B4DXR9 585 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 H3BSH0 61 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 CCRL2O00421 344 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 LMX1BO60663 402 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 LY6HO94772 140 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 ACAA1P09110 424 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 IRF2P14316 349 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 ATF1P18846 271 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 FSTP19883 344 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 RAB3AP20336 220 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 CPT2P23786 658 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 THBS2P35442 1172 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 RBP2P50120 134 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 UNQ9370/PRO34162Q6UXP9 181 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 KCTD8Q6ZWB6 473 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 MOGAT3Q86VF5 341 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 DVL3Q92997 716 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 BORCS8Q96FH0 119 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 DERL3Q96Q80 235 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 PKIBQ9C010 78 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-201ENST00000361439 CREBBPQ92793 2442 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 IGKV1-9A0A0C4DH69 117 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 TMEM178BH3BS89 294 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 MAGEB3O15480 346 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 CDC14BO60729 498 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 ALDOBP05062 364 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 GRPP07492 148 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 OCMP0CE72 109 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 JUNBP17275 347 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 MPZP25189 248 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 PSMB9P28065 219 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 SOX2P48431 317 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 ATP1B3P54709 279 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 PPP3R1P63098 170 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 MPPED2Q15777 294 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 ACSM3Q53FZ2 586 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 PRAMEF6Q5VXH4 476 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 CD200R1LQ6Q8B3 271 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 WDR86Q86TI4 376 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 CDH26Q8IXH8 852 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 C11orf53Q8IXP5 236 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 SCCPDHQ8NBX0 429 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 ZNF671Q8TAW3 534 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 RAB1CQ92928 201 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 MUL1Q969V5 352 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 OR14A2Q96R54 314 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 TMED9Q9BVK6 235 aa11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 FGF23Q9GZV9 251 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-201ENST00000361439 PPP1R3EQ9H7J1 279 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms